UPDATED: 6-6-2024
2024
- Design and Semisynthesis of Biselectrophile-Functionalized Ubiquitin Probes To Investigate Transthioesterification Reactions. Delos Reyes AMV, Lux MC, Hann ZS, Ji C, Kochańczyk T, DiBello M, Lima CD, Tan DS.Org Lett. 2024 May 23. doi: 10.1021/acs.orglett.4c01102. Online ahead of print.PMID: 38781175
The uniqueness of on-demand male contraception. Sanchez NDRR, Ritagliati C, Kopf GS, Kretschmer S, Buck J, Levin LR.Mol Aspects Med. 2024 May 27;97:101281. doi: 10.1016/j.mam.2024.101281. Online ahead of print.PMID: 38805792
- IL-18-secreting multi-antigen targeting CAR T-cells eliminate antigen-low myeloma in an immunocompetent mouse model. Ng Brandon D, Rajagopalan A, Kousa AI, Fischman JS, Chen S, Massa AR, Elias HK, Manuele D, Galiano M, Lemarquis AL, Boardman AP, DeWolf S, Pierce JA, Bogen B, James SE, van den Brink MRM.Blood. 2024 Apr 5:blood.2023022293. doi: 10.1182/blood.2023022293. Online ahead of print.PMID: 38579288
- Interrogating the Theranostic Capacity of a MUC16-Targeted Antibody for Ovarian Cancer.Mack KN, Samuels ZV, Carter LM, Viray TD, Mandleywala K, Brooks CL, Hollingsworth MA, Radhakrishnan P, Lewis JS.J Nucl Med. 2024 Apr 1;65(4):580-585. doi: 10.2967/jnumed.123.266524.PMID: 38485271
- Retinoic acid receptor α activity in proximal tubules prevents kidney injury and fibrosis. DiKun KM, Tang XH, Fu L, Choi ME, Lu C, Gudas LJ.Proc Natl Acad Sci U S A. 2024 Feb 13;121(7):e2311803121. doi: 10.1073/pnas.2311803121. Epub 2024 Feb 8.PMID: 38330015
- Highly efficient cellular expression of circular mRNA enables prolonged protein expression. Unti MJ, Jaffrey SR. Cell Chem Biol. 2024 Jan 18;31(1):163-176.e5. doi: 10.1016/j.chembiol.2023.09.015. Epub 2023 Oct 25.PMID: 37883972
- Thinking outside the chromosome: epigenetic mechanisms in non-canonical chromatin species.Agustinus AS, David Y.Nat Struct Mol Biol. 2024 Jan;31(1):8-10. doi: 10.1038/s41594-023-01200-7.
- Design and synthesis of a library of C2-substituted sulfamidoadenosines to probe bacterial permeability. Zhao S, Maceren J, Chung M, Stone S, Geißen R, Boby ML, Sherborne BS, Tan DS.Bioorg Med Chem Lett. 2024 Jan 1;97:129486. doi: 10.1016/j.bmcl.2023.129486. Epub 2023 Sep 20.PMID: 37734424
2023
- Direct conversion of amino acids to oxetanol bioisosteres via photoredox catalysis.Delos Reyes AMV, Nieves Escobar CS, Muñoz A, Huffman MI, Tan DS.Chem Sci. 2023 Sep 15;14(38):10524-10531. doi: 10.1039/d3sc00936j. eCollection 2023 Oct 4.PMID: 37799988
Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors. Boby ML, …See abstract for full author list ➔Science. 2023 Nov 10;382(6671):eabo7201. doi: 10.1126/science.abo7201. Epub 2023 Nov 10.PMID: 37943932
- Engineering CAR-T cells for radiohapten capture in imaging and radioimmunotherapy applications. Keifer Kurtz, Laura Eibler, Megan M. Dacek, Lukas M. Carter, Darren R. Veach, Samantha Lovibond, Emma Reynaud, Sarah Qureshy, Michael R. McDevitt, Christopher Bourne, Sebastien Monette, Blesida Punzalan, Shireen Khayat, Svena Verma, Adam L. Kesner, Nai-Kong V. Cheung, Heiko Schöder, Leah Gajeck, Sarah M. Cheal, Steven M. Larson, David A. Scheinberg, Simone Krebsbio
- A druggable FOXA1-glucocorticoid receptor transcriptional axis drives tumor 1 growth in a subset of non-small cell lung cancer. Authors: Madeline A. Dorso, Payal T. Patel, Aleksandr Pankov, Jacob A. Boyer, Rajesh Soni, Isabella S. Del Priore, Omar Hayatt, Amanda Kulick, Connor J., Hagen, Elisa de Stanchina, Melissa R. Junttila, Anneleen, Daemen, Lori S., Friedman, Ronald C. Hendrickson, Sarat Chandarlapaty https://doi.org/10.1158/2767-9764.CRC-23-0310; Cancer Research Communications CRC-23-0310. RESEARCH ARTICLE| AUGUST 17 2023
Control of G protein-coupled receptor function via membrane interacting intrinsically disordered C-terminal domains. Chiara Mancinelli, Dagan C. Marx, Alberto J. Gonzalez-Hernandez Lucia Mancinelli, George Khelashvilli, Joshua Levitz, David Eliezer. doi: https://doi.org/10.1101/2023.08.16.553551 ; August 17, 2023.
Development of a p-Hydroxybenzyl-Alcohol-Linked Glutamate Prodrug for Activation by Pseudomonas Carboxypeptidase G2. Lee JP, Corless BC, Gardner TJ, Scheinberg DA, Tan DS.Org Lett. 2023 Aug 21. doi: 10.1021/acs.orglett.3c02130. Online ahead of print.PMID: 37602700
Epigenetic dysregulation from chromosomal transit in micronuclei, Albert S. Agustinus, Duaa Al-Rawi, Bhargavi Dameracharla, Ramya Raviram, Bailey S. C. L. Jones, Stephanie Stransky, Lorenzo Scipioni, Jens Luebeck, Melody Di Bona, Danguole Norkunaite, Robert M. Myers, Mercedes Duran, Seongmin Choi, Britta Weigelt, Shira Yomtoubian, Andrew McPherson, Eléonore Toufektchan, Kristina Keuper, Paul S. Mischel, Vivek Mittal, Sohrab P. Shah, John Maciejowski, Zuzana Storchova, Enrico Gratton, Peter Ly, Dan Landau, Mathieu F. Bakhoum, Richard P. Koche, Simone Sidoli, Vineet Bafna, Yael David & Samuel F. Bakhoum Show fewer authors. Nature (2023)Cite this article
- Scaffold Hopping and Optimization of Small Molecule Soluble Adenyl Cyclase Inhibitors Led by Free Energy Perturbation.Sun S, Fushimi M, Rossetti T, Kaur N, Ferreira J, Miller M, Quast J, van den Heuvel J, Steegborn C, Levin LR, Buck J, Myers RW, Kargman S, Liverton N, Meinke PT, Huggins DJ.J Chem Inf Model. 2023 May 8;63(9):2828-2841. doi: 10.1021/acs.jcim.2c01577. Epub 2023 Apr 15.PMID: 37060320
- Chemoenzymatic Synthesis of Novel Cytotoxic Epoxyketones Using the Eponemycin Biosynthetic Enzyme EpnF.Corless BC, Geißen R, Prescott NA, David Y, Scheinberg DA, Tan DS.ACS Chem Biol. 2023 May 12. doi: 10.1021/acschembio.3c00080. Online ahead of print.PMID: 37172287
- BTG1 mutation yields supercompetitive B cells primed for malignant transformation. Mlynarczyk C, Teater M, Pae J, Chin CR, Wang L, Arulraj T, Barisic D, Papin A, Hoehn KB, Kots E, Ersching J, Bandyopadhyay A, Barin E, Poh HX, Evans CM, Chadburn A, Chen Z, Shen H, Isles HM, Pelzer B, Tsialta I, Doane AS, Geng H, Rehman MH, Melnick J, Morgan W, Nguyen DTT, Elemento O, Kharas MG, Jaffrey SR, Scott DW, Khelashvili G, Meyer-Hermann M, Victora GD, Melnick A.Science. 2023 Jan 20;379(6629):eabj7412. doi: 10.1126/science.abj7412. Epub 2023 Jan 20.PMID: 36656933
- P-selectin-targeted nanocarriers induce active crossing of the blood-brain barrier via caveolin-1-dependent transcytosis. Tylawsky DE, Kiguchi H, Vaynshteyn J, Gerwin J, Shah J, Islam T, Boyer JA, Boué DR, Snuderl M, Greenblatt MB, Shamay Y, Raju GP, Heller DA.Nat Mater. 2023 Mar;22(3):391-399. doi: 10.1038/s41563-023-01481-9. Epub 2023 Mar 2.PMID: 36864161
- On-demand male contraception via acute inhibition of soluble adenylyl cyclase. Balbach M, Rossetti T, Ferreira J, Ghanem L, Ritagliati C, Myers RW, Huggins DJ, Steegborn C, Miranda IC, Meinke PT, Buck J, Levin LR.Nat Commun. 2023 Feb 14;14(1):637. doi: 10.1038/s41467-023-36119-6.PMID: 36788210
2022
- Design, Synthesis, and Pharmacological Evaluation of Second-Generation Soluble Adenylyl Cyclase (sAC, ADCY10) Inhibitors with Slow Dissociation Rates. Miller M, Rossetti T, Ferreira J, Ghanem L, Balbach M, Kaur N, Levin LR, Buck J, Kehr M, Coquille S, van den Heuvel J, Steegborn C, Fushimi M, Finkin-Groner E, Myers RW, Kargman S, Liverton NJ, Huggins DJ, Meinke PT.J Med Chem. 2022 Nov 24;65(22):15208-15226. doi: 10.1021/acs.jmedchem.2c01133. Epub 2022 Nov 8.PMID: 36346696
- EGFR-Targeted ImmunoPET of UMUC3 Orthotopic Bladder Tumors.Hoang TT, Mandleywala K, Viray T, Tan KV, Lewis JS, Pereira PMR.Mol Imaging Biol. 2022 Aug;24(4):511-518. doi: 10.1007/s11307-022-01708-2. Epub 2022 Feb 11.PMID: 35147837
- Sharma SK, Mack KN, Piersigilli A, Pourat J, Edwards KJ, Keinänen O, Jiao MS, Zhao H, White B, Brooks CL, de Stanchina E, Madiyalakan MR, Hollingsworth MA, Radhakrishnan P, Lewis JS, Zeglis BM. ImmunoPET of Ovarian and Pancreatic Cancer with AR9.6, a Novel MUC16-Targeted Therapeutic Antibody. Clin Cancer Res. 2022 Mar 1;28(5):948-959. doi: 10.1158/1078-0432.CCR-21-1798. PMID: 34907079; PMCID: PMC8898287.
- Hsiao JC, Neugroschl AR, Chui AJ, Taabazuing CY, Griswold AR, Wang Q, Huang HC, Orth-He EL, Ball DP, Hiotis G, Bachovchin DA. A ubiquitin-independent proteasome pathway controls activation of the CARD8 inflammasome. J Biol Chem. 2022 Jul;298(7):102032. doi: 10.1016/j.jbc.2022.102032. Epub 2022 May 14. PMID: 35580636; PMCID: PMC9213247.
- Antman-Passig, M., Wong, E., Frost, G. R., Cupo, C., Shah, J., Agustinus, A., Chen, Z., Mancinelli, C., Kamel, M., Li, T., Jonas, L. A., Li, Y. M., & Heller, D. A. (2022). Optical Nanosensor for Intracellular and Intracranial Detection of Amyloid-Beta. ACS Nano. https://doi.org/10.1021/acsnano.2c00054
- Acosta, D. M., Mancinelli, C., Bracken, C., & Eliezer, D. (2022). Post-translational modifications within tau paired helical filament nucleating motifs perturb microtubule interactions and oligomer formation. Journal of Biological Chemistry, 298(1), 101442. https://doi.org/10.1016/j.jbc.2021.101442
- Rossetti T, Ferreira J, Ghanem L, Buck H, Steegborn C, Myers RW, Meinke PT, Levin LR, Buck J. Assessing potency and binding kinetics of soluble adenylyl cyclase (sAC) inhibitors to maximize therapeutic potential. Front Physiol. 2022 Sep 28;13:1013845. doi: 10.3389/fphys.2022.1013845. PMID: 36246105; PMCID: PMC9554468.
- Seaho Kim, CheukMan C Au, Mohd Azrin Bin Jamalruddin, Naira Essam Abou-Ghali, Eiman Mukhtar, Luigi Portella, Adeline Berger, Daniel Worroll, Prerna Vatsa, David S Rickman, David M Nanus, Paraskevi Giannakakou (2022) AR-V7 exhibits non-canonical mechanisms of nuclear import and chromatin engagement in castrate-resistant prostate cancer eLife 11:e73396 https://doi.org/10.7554/eLife.73396
- TP53 mutations and RNA-binding protein MUSASHI-2 drive resistance to PRMT5-targeted therapy in B-cell lymphoma. Erazo T, Evans CM, Zakheim D, Chu KL, Refermat AY, Asgari Z, Yang X, Da Silva Ferreira M, Mehta S, Russo MV, Knezevic A, Zhang XP, Chen Z, Fennell M, Garippa R, Seshan V, de Stanchina E, Barbash O, Batlevi CL, Leslie CS, Melnick AM, Younes A, Kharas MG.Nat Commun. 2022 Sep 27;13(1):5676. doi: 10.1038/s41467-022-33137-8.PMID: 36167829
Front. Pharmacol., 03 January 2022, Kidney-Targeted Redox Scavenger Therapy Prevents Cisplatin-Induced Acute Kidney Injury, Ryan M. Williams, Janki Shah, Elizabeth Mercer, Helen S. Tian, Vanessa Thompson, Justin M. Cheung, Madeline Dorso, Jaclyn M. Kubala, Lorraine J. Gudas, Elisa de Stanchina, Edgar A. Jaimes,and Daniel A. Heller
2021
Listening in on the conversation between the human gut microbiome and its host; Wendy Lin, Ana Djukovic, Deepti Mathur, Joao B Xavier , Affiliations expand; PMID: 34352595, DOI: 10.1016/j.mib.2021.07.009
- Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment.Sharif H, Hollingsworth LR, Griswold AR, Hsiao JC, Wang Q, Bachovchin DA, Wu H.Immunity. 2021 Jul 13;54(7):1392-1404.e10. doi: 10.1016/j.immuni.2021.04.024. Epub 2021 May 20.PMID: 34019797
- Gardner TJ, Lee JP, Bourne CM, Wijewarnasuriya D, Kinarivala N, Kurtz KG, Corless BC, Dacek MM, Chang AY, Mo G, Nguyen KM, Brentjens RJ, Tan DS, Scheinberg DA. Engineering CAR-T cells to activate small-molecule drugs in situ. Nat Chem Biol. 2021 Dec 30. doi: 10.1038/s41589-021-00932-1. Online ahead of print.PMID: 34969970
R Langenbacher, J Budhathoki-Uprety, PV Jena, D Roxbury, J Streit, M Zheng, DA Heller*. “Single-Chirality Near-Infrared Carbon Nanotube Sub-Cellular Imaging and FRET Probes.” Nano Letters 21 (2021) 6441-6448. https://pubs.acs.org/doi/10.1021/acs.nanolett.1c01093
- Yaari Z, Yang Y, Apfelbaum E, Cupo C, Settle AH, Cullen Q, Cai W, Roche KL, Levine DA, Fleisher M, Ramanathan L, Zheng M, Jagota A, Heller DA. A perception-based nanosensor platform to detect cancer biomarkers. Sci Adv. 2021 Nov 19;7(47):eabj0852. doi: 10.1126/sciadv.abj0852. Epub 2021 Nov 19.PMID: 34797711
- Balbach M, Ghanem L, Rossetti T, Kaur N, Ritagliati C, Ferreira J, Krapf D, Puga Molina LC, Santi CM, Hansen JN, Wachten D, Fushimi M, Meinke PT, Buck J, Levin LR. Soluble adenylyl cyclase inhibition prevents human sperm functions essential for fertilization. Mol Hum Reprod. 2021 Sep 1;27(9):gaab054. doi: 10.1093/molehr/gaab054. PMID: 34463764
- Fushimi M, Buck H, Balbach M, Gorovyy A, Ferreira J, Rossetti T, Kaur N, Levin LR, Buck J, Quast J, van den Heuvel J, Steegborn C, Finkin-Groner E, Kargman S, Michino M, Foley MA, Miller M, Liverton NJ, Huggins DJ, Meinke PT. Discovery of TDI-10229: A Potent and Orally Bioavailable Inhibitor of Soluble Adenylyl Cyclase (sAC, ADCY10). ACS Med Chem Lett. 2021 Jul 14;12(8):1283-1287. doi: 10.1021/acsmedchemlett.1c00273. eCollection 2021 Aug 12. PMID: 34413957
- Chow A, Schad S, Green MD, Hellmann MD, Allaj V, Ceglia N, Zago G, Shah NS, Sharma SK, Mattar M, Chan J, Rizvi H, Zhong H, Liu C, Bykov Y, Zamarin D, Shi H, Budhu S, Wohlhieter C, Uddin F, Gupta A, Khodos I, Waninger JJ, Qin A, Markowitz GJ, Mittal V, Balachandran V, Durham JN, Le DT, Zou W, Shah SP, McPherson A, Panageas K, Lewis JS, Perry JSA, de Stanchina E, Sen T, Poirier JT, Wolchok JD, Rudin CM, Merghoub T. Tim-4+ cavity-resident macrophages impair anti-tumor CD8+ T cell immunity Cancer Cell. 2021 Jul 12;39(7):973-988.e9. doi: 10.1016/j.ccell.2021.05.006. Epub 2021 Jun 10.PMID: 34115989
Zappasodi R, Serganova I, Cohen IJ, Maeda M, Shindo M, Senbabaoglu Y, Watson MJ, Leftin A, Maniyar R, Verma S, Lubin M, Ko M, Mane MM, Zhong H, Liu C, Ghosh A, Abu-Akeel M, Ackerstaff E, Koutcher JA, Ho PC, Delgoffe GM, Blasberg R, Wolchok JD, Merghoub T. CTLA-4 blockade drives loss of T<sub>reg</sub> stability in glycolysis-low tumours. Nature. 2021 Mar;591(7851):652-658. doi: 10.1038/s41586-021-03326-4. Epub 2021 Feb 15. PMID: 33588426.
Henry KE, Shaffer T, Mack KN, Ring J, Ogirala A, Klein-Scory S, Eilert-Micus C, Schmiegel W, Bracht T, Sitek B, Clyne M, Reid C, Sipos B, Lewis JS, Kalthoff H, Grimm J. Exploiting the MUC5AC Antigen for Noninvasive Identification of Pancreatic Cancer. J Nucl Med. 2021 Mar 12:jnumed.120.256776. doi: 10.2967/jnumed.120.256776. Epub ahead of print. PMID: 33712530.
- Henry KE, Mack KN, Nagle VL, Cornejo M, Michel AO, Fox IL, Davydova M, Dilling TR, Pillarsetty N, Lewis JS. ERK Inhibition Improves Anti-PD-L1 Immune Checkpoint Blockade in Preclinical Pancreatic Ductal Adenocarcinoma. Mol Cancer Ther. 2021 Oct;20(10):2026-2034. doi: 10.1158/1535-7163.MCT-20-1112. Epub 2021 Aug 4. PMID: 34349003; PMCID: PMC8492510.
Rossetti T, Jackvony S, Buck J, Levin LR. Bicarbonate, carbon dioxide and pH sensing via mammalian bicarbonate-regulated soluble adenylyl cyclase. Interface Focus. 2021 Apr 6;11(2):20200034. doi: 10.1098/rsfs.2020.0034. Epub 2021 Feb 12. PMID: 33633833.
- Volpe A, Nagle VL, Lewis JS, Ponomarev V. Predicting CAR-T cell Immunotherapy Success through ImmunoPET. Clin Cancer Res. 2021 Feb 15;27(4):911-912. doi: 10.1158/1078-0432.CCR-20-4297. Epub 2020 Dec 16. PMID: 33328345.
- Nagle VL, Henry KE, Hertz CAJ, Graham MS, Campos C, Parada LF, Pandit-Taskar N, Schietinger A, Mellinghoff IK, Lewis JS. Imaging Tumor-Infiltrating Lymphocytes in Brain Tumors with [<sup>64</sup>Cu]Cu-NOTA-anti-CD8 PET. Clin Cancer Res. 2021 Apr 1;27(7):1958-1966. doi: 10.1158/1078-0432.CCR-20-3243. Epub 2021 Jan 25. PMID: 33495310.
Sharma SK, Adumeau P, Keinänen O, Sisodiya V, Sarvaiya H, Tchelepi R, Korsen JA, Pourat J, Edwards KJ, Ragupathi A, Hamdy O, Saunders LR, Rudin CM, Poirier JT, Lewis JS, Zeglis BM. Synthesis and Comparative <i>In Vivo</i> Evaluation of Site-Specifically Labeled Radioimmunoconjugates for DLL3-Targeted ImmunoPET. Bioconjug Chem. 2021 Apr 9. doi: 10.1021/acs.bioconjchem.1c00121. Epub ahead of print. PMID: 33835770.
Jones HF, Molvi Z, Klatt MG, Dao T, Scheinberg DA. Empirical and Rational Design of T Cell Receptor-Based Immunotherapies. Front Immunol. 2021 Jan 25;11:585385. doi: 10.3389/fimmu.2020.585385. PMID: 33569049.
- Yang L, Han Y, Jaffré F, Nilsson-Payant BE, Bram Y, Wang P, Zhu J, Zhang T, Redmond D, Houghton S, Uhl S, Borczuk A, Huang Y, Richardson C, Chandar V, Acklin JA, Lim JK, Xiang J, Ho DD, tenOever BR, Schwartz RE, Evans T, Chen Z, Chen S. An Immuno-Cardiac Model for Macrophage-Mediated Inflammation in COVID-19 Hearts. Circ Res. 2021 Apr 15. doi: 10.1161/CIRCRESAHA.121.319060. Epub ahead of print. PMID: 33853355.
- Williams RM, Chen S, Langenbacher RE, Galassi TV, Harvey JD, Jena PV, Budhathoki-Uprety J, Luo M, Heller DA. Harnessing nanotechnology to expand the toolbox of chemical biology. Nat Chem Biol. 2021 Feb;17(2):129-137. doi: 10.1038/s41589-020-00690-6. Epub 2021 Jan 7. PMID: 33414556.
- Dacek MM, Veach DR, Cheal SM, Carter LM, McDevitt MR, Punzalan B, Burnes Vargas D, Kubik TZ, Monette S, Santich BH, Yang G, Ouerfelli O, Kesner AL, Cheung NV, Scheinberg DA, Larson SM, Krebs S. Engineered Cells as a Test Platform for Radiohaptens in Pretargeted Imaging and Radioimmunotherapy Applications. Bioconjug Chem. 2021 Apr 21;32(4):649-654. doi: 10.1021/acs.bioconjchem.0c00595. Epub 2021 Apr 5. PMID: 33819023.
2020
- Chui, A.C.; Griswold, A.R.; Taabazuing, C.Y.; Orth, E.L.; Gai, K.; Rao, S.D.; Ball, D.P.;Hi Je. # “Activation of the CARD8 inflammasome requires a disordered region.” Cell Reports. 2020, 33, 108264.
- Wohlhieter CA, Richards AL, Uddin F, Hulton CH, Quintanal-Villalonga À, Martin A, de Stanchina E, Bhanot U, Asher M, Shah NS, Hayatt O, Buonocore DJ, Rekhtman N, Shen R, Arbour KC, Donoghue M, Poirier JT, Sen T, Rudin CM. Concurrent Mutations in STK11 and KEAP1 Promote Ferroptosis Protection and SCD1 Dependence in Lung Cancer.Cell Rep. 2020 Dec 1;33(9):108444. doi:10.1016/j.celrep.2020.108444.PMID: 33264619
- Kuhn NF, Lopez AV, Li X, Cai W, Daniyan AF, Brentjens RJ. CD103<sup>+</sup> cDC1 and endogenous CD8<sup>+</sup> T cells are necessary for improved CD40L-overexpressing CAR T cell antitumor function. Nat Commun. 2020 Dec 2;11(1):6171. doi: 10.1038/s41467-020-19833-3. PMID: 33268774.
- Henry KE, Chaney AM, Nagle VL, Cropper HC, Mozaffari S, Slaybaugh G, Parang K, Andreev OA, Reshetnyak YK, James ML, Lewis JS. Demarcation of Sepsis-Induced Peripheral and Central Acidosis with pH (Low) Insertion Cycle Peptide. J Nucl Med. 2020 Sep;61(9):1361-1368. doi: 10.2967/jnumed.119.233072. Epub 2020 Jan 31. PMID: 32005774.
- Pandya DN, Henry KE, Day CS, Graves SA, Nagle VL, Dilling TR, Sinha A, Ehrmann BM, Bhatt NB, Menda Y, Lewis JS, Wadas TJ. Polyazamacrocycle Ligands Facilitate <sup>89</sup>Zr Radiochemistry and Yield <sup>89</sup>Zr Complexes with Remarkable Stability. Inorg Chem. 2020 Dec 7;59(23):17473-17487. doi: 10.1021/acs.inorgchem.0c02722. Epub 2020 Nov 10. PMID: 33169605.
Frost GR, Longo V, Li T, Jonas LA, Judenhofer M, Cherry S, Koutcher J, Lekaye C, Zanzonico P, Li YM. Author Correction: Hybrid PET/MRI enables high-spatial resolution, quantitative imaging of amyloid plaques in an Alzheimer's disease mouse model. Sci Rep. 2020 Aug 11;10(1):13826. doi: 10.1038/s41598-020-70134-7. Erratum for: Sci Rep. 2020 Jun 25;10(1):10379. PMID: 32778663.
- Chaudhuri PK, Wang MS, Black CT, Huse M, Kam LC. Modulating T Cell Activation Using Depth Sensing Topographic Cues. Adv Biosyst. 2020 Sep;4(9):e2000143. doi: 10.1002/adbi.202000143. Epub 2020 Aug 3. PMID: 32744809.
- Ruscetti M, Morris JP 4th, Mezzadra R, Russell J, Leibold J, Romesser PB, Simon J, Kulick A, Ho YJ, Fennell M, Li J, Norgard RJ, Wilkinson JE, Alonso-Curbelo D, Sridharan R,Heller DA, de Stanchina E, Stanger BZ, Sherr CJ, Lowe SW. Senescence-Induced Vascular Remodeling Creates Therapeutic Vulnerabilities in Pancreas Cancer. Cell. 2020 Apr 16;181(2):424-441.e21. doi: 10.1016/j.cell.2020.03.008. Epub 2020 Mar Mar 31. PMID: 32234521.
- Parsa S, Ortega-Molina A, Ying HY, Jiang M, Teater M, Wang J, Zhao C, Reznik E, Pasion JP, Kuo D, Mohan P, Wang S, Camarillo JM, Thomas PM, Jain N, Garcia-Bermudez J, Cho BK, Tam W, Kelleher NL, Socci N, Dogan A, De Stanchina E, Ciriello G, Green MR, Li S, Birsoy K, Melnick AM, Wendel HG. The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing. Nat Cancer. 2020;1:653-664. doi: 10.1038/s43018-020-0080-0. Epub 2020 Jun 22. PMID: 33569544.
Huang TH, Fowler F, Chen CC, Shen ZJ, Sleckman B, Tyler JK. The Histone Chaperones ASF1 and CAF-1 Promote MMS22L-TONSL-Mediated Rad51 Loading onto ssDNA during Homologous Recombination in Human Cells. Mol Cell. 2020 Mar 5;77(5):1153. doi: 10.1016/j.molcel.2020.02.019. Erratum for: Mol Cell. 2018 Mar 1;69(5):879-892.e5. PMID: 32142686.
- Nguyen DTT, Lu Y, Chu KL, Yang X, Park SM, Choo ZN, Chin CR, Prieto C, Schurer A, Barin E, Savino AM, Gourkanti S, Patel P, Vu LP, Leslie CS, Kharas MG. HyperTRIBE uncovers increased MUSASHI-2 RNA binding activity and differential regulation in leukemic stem cells. Nat Commun. 2020 Apr 24;11(1):2026. doi: 10.1038/s41467-020-15814-8. PMID: 32332729.
- Wijewarnasuriya D, Bebernitz C, Lopez AV, Rafiq S, Brentjens RJ. Excessive Costimulation Leads to Dysfunction of Adoptively Transferred T Cells. Cancer Immunol Res. 2020 Jun;8(6):732-742. doi: 10.1158/2326-6066.CIR-19-0908. Epub 2020 Mar 25. PMID: 32213625.
- Pratt EC, Isaac E, Stater EP, Yang G, Ouerfelli O, Pillarsetty N, Grimm J. Synthesis of the PET Tracer <sup>124</sup>I-Trametinib for MAPK/ERK Kinase Distribution and Resistance Monitoring. J Nucl Med. 2020 Dec;61(12):1845-1850. doi: 10.2967/jnumed.120.241901. Epub 2020 May 22. PMID: 32444378.
- Kinarivala N, Standke LC, Guney T, Ji C, Noguchi N, Asano Y, Tan DS. Gram-scale preparation of the antibiotic lead compound salicyl-AMS, a potent inhibitor of bacterial salicylate adenylation enzymes. Methods Enzymol. 2020;638:69-87. doi: 10.1016/bs.mie.2020.04.051. Epub 2020 May 5. PMID: 32416922.
Gardner TJ, Bourne CM, Dacek MM, Kurtz K, Malviya M, Peraro L, Silberman PC, Vogt KC, Unti MJ, Brentjens R, Scheinberg D. Targeted Cellular Micropharmacies: Cells Engineered for Localized Drug Delivery. Cancers (Basel). 2020 Aug 5;12(8):2175. doi: 10.3390 /cancers12082175. PMID: 32764348.
Hur JY, Frost GR, Wu X, Crump C, Pan SJ, Wong E, Barros M, Li T, Nie P, Zhai Y, Wang JC, Tcw J, Guo L, McKenzie A, Ming C, Zhou X, Wang M, Sagi Y, Renton AE, Esposito BT, Kim Y, Sadleir KR, Trinh I, Rissman RA, Vassar R, Zhang B, Johnson DS, Masliah E, Greengard P, Goate A, Li YM. The innate immunity protein IFITM3 modulates γ-secretase in Alzheimer's disease. Nature. 2020 Sep 2. doi: 10.1038/s41586-020-2681-2. Online ahead of print. PMID: 32879487
- Drakes DJ, Rafiq S, Purdon TJ, Lopez AV, Chandran SS, Klebanoff CA, Brentjens RJ. Optimization of T-cell receptor-modified T cells for cancer therapy. Cancer Immunol Res. 2020 Mar 24. pii: canimm.0910.2019. doi: 10.1158/2326-6066.CIR-19-0910. PMID:32209638.
Tang B, Li X, Maretzky T, Perez-Aguilar JM, McIlwain D, Xie Y, Zheng Y, Mak TW, Weinstein H, Blobel CP. FASEB J. 2020 Apr;34(4):4956-4969. doi: 10.1096/fj.201902649R. Epub 2020 Feb 26. Substrate-selective protein ectodomain shedding by ADAM17 and iRhom2 depends on their juxtamembrane and transmembrane domains. PMID: 32103528.
2019
Serio RN, Lu C, Gross SS, Gudas LJ. Different Effects of Knockouts in ALDH2 and ACSS2 on Embryonic Stem Cell Differentiation. Alcohol Clin Exp Res. 2019 Sep;43(9):1859-1871. doi: 10.1111/acer.14146. Epub 2019 Aug 5. PMID:31283017
- Jiang Y, Gao R, Cao C, Forbes L, Li J, Freeberg S, Fredenburg KM, Justice JM, Silver NL, Wu L, Varma S, West R, Licht JD, Zajac-Kaye M, Kentsis A, Kaye FJ. MYB-activated models for testing therapeutic agents in adenoid cystic carcinoma. Oral Oncol. 2019 Oct 10;98:147-155. doi: 10.1016/j.oraloncology.2019.09.005. [Epub ahead of print] PubMed PMID: 31606723.
- Oh CY, Klatt MG, Bourne C, Dao T, Dacek MM, Brea EJ, Mun SS, Chang AY, Korontsvit T, Scheinberg DA. ALK and RET inhibitors promote HLA class I antigen presentation and unmask new antigens within the tumor immunopeptidome. Cancer Immunol Res. 2019 Sep 20. pii: canimm.0056.2019. doi: 10.1158/2326-6066.CIR-19-0056. [Epub ahead of print] PubMed PMID: 31540894.
- Khan JF, Khan AS, Brentjens RJ. Application of CAR T cells for the treatment of solid tumors. Prog Mol Biol Transl Sci. 2019;164:293-327. doi: 10.1016/bs.pmbts.2019.07.004. Epub 2019 Jul 23. PubMed PMID: 31383408.
- Bhupathiraju NVSDK, Younes A, Cao M, Ali J, Cicek HT, Tully KM, Ponnala S, Babich JW, Deri MA, Lewis JS, Francesconi LC, Drain CM. Improved synthesis of the bifunctional chelator p-SCN-Bn-HOPO. Org Biomol Chem. 2019 Jul 17;17(28):6866-6871. doi: 10.1039/c9ob01068h. PubMed PMID: 31268109; PubMed Central PMCID: PMC6640124.
- Lux MC, Boby ML, Brooks JL, Tan DS. Synthesis of bicyclic ethers by a palladium-catalyzed oxidative cyclization-redox relay-π-allyl-Pd cyclization cascade reaction. Chem Commun (Camb). 2019 Jun 21;55(49):7013-7016. doi: 10.1039/c9cc03775f. Epub 2019 May 31. PubMed PMID: 31147660; PubMed Central PMCID: PMC6601619.
- Sharma SK, Lyashchenko SK, Park HA, Pillarsetty N, Roux Y, Wu J, Poty S, Tully KM, Poirier JT, Lewis JS. A rapid bead-based radioligand binding assay for the determination of target-binding fraction and quality control of radiopharmaceuticals. Nucl Med Biol. 2019 Apr;71:32-38. doi: 10.1016/j.nucmedbio.2019.04.005. Epub 2019 May 3. PubMed PMID: 31128476; PubMed Central PMCID: PMC6599726.
- Choi H, Deng J, Li S, Silk T, Dong L, Brea EJ, Houghton S, Redmond D, Zhong H, Boiarsky J, Akbay EA, Smith PD, Merghoub T, Wong KK, Wolchok JD. Pulsatile MEK Inhibition Improves Anti-tumor Immunity and T Cell Function in Murine Kras Mutant Lung Cancer. Cell Rep. 2019 Apr 16;27(3):806-819.e5. doi: 10.1016/j.celrep.2019.03.066. PubMed PMID: 30995478; PubMed Central PMCID: PMC6719696.
- Lux MC, Standke LC, Tan DS. Targeting adenylate-forming enzymes with designed sulfonyladenosine inhibitors. J Antibiot (Tokyo). 2019 Jun;72(6):325-349. doi: 10.1038/s41429-019-0171-2. Epub 2019 Apr 15. Review. PubMed PMID: 30982830; PubMed Central PMCID: PMC6594144.
- Wong E, Liao GP, Chang JC, Xu P, Li YM, Greengard P. GSAP modulates γ-secretase specificity by inducing conformational change in PS1. Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):6385-6390. doi: 10.1073/pnas.1820160116. Epub 2019 Mar 8. PubMed PMID: 30850537; PubMed Central PMCID: PMC6442608.
- Trujillo-Alonso, Pratt EC, Zong H, Lara-Martinez A, Kaittanis C, Rabie M, Longo V, Becker MW, Roboz GJ, Grimm J, Guzman ML. FDA-approved ferumoxytol displays anti-leukaemia efficacy against cells with low ferroportin levels. Nat Nanotechnol. 2019 Mar 25. doi: 10.1038/s41565-019-0406-1. PMID: 30911166 DOI: 10.1038/s41565-019-0406-1
- Tamzalit F, Wang MS, Jin W, Tello-Lafoz M, Boyko V, Heddleston JM, Black CT, Kam LC, Huse M. Interfacial actin protrusions mechanically enhance killing by cytotoxic T cells. Sci Immunol. 2019 Mar 22;4(33). pii: eaav5445. doi: 10.1126/sciimmunol.aav5445. PubMed PMID: 30902904; PubMed Central PMCID: PMC6746172.
- Bythrow GV, Mohandas P, Guney T, Standke LC, Germain GA, Lu X, Ji C, Levendosky K, Chavadi SS, Tan DS, Quadri LEN. Kinetic Analyses of the Siderophore Biosynthesis Inhibitor Salicyl-AMS and Analogues as MbtA Inhibitors and Antimycobacterial Agents. Biochemistry. 2019 Feb 12;58(6):833-847. doi: 10.1021/acs.biochem.8b01153. Epub 2019 Jan 10. PubMed PMID: 30582694; PubMed Central PMCID: PMC6530907.
- Serio RN, Laursen KB, Urvalek AM, Gross SS, Gudas LJ. Ethanol promotes differentiation of embryonic stem cells through retinoic acid receptor-γ. J Biol Chem. 2019 Feb 8. pii: jbc.RA118.007153. doi: 10.1074/jbc.RA118.007153. [Epub ahead of print] PubMed PMID: 30737277. PMCID: 6462535
2018 (Updated 10/2019)
- Gejman RS, Chang AY, Jones HF, DiKun K, Hakimi AA, Schietinger A, Scheinberg DA. Rejection of immunogenic tumor clones is limited by clonal fraction. Elife. 2018 Nov 30;7. pii: e41090. doi: 10.7554/eLife.41090. PubMed PMID: 30499773; PubMed Central PMCID: PMC6269121.
- Rafiq S, Yeku OO, Jackson HJ, Purdon TJ, van Leeuwen DG, Drakes DJ, Song M, Miele MM, Li Z, Wang P, Yan S, Xiang J, Ma X, Seshan VE, Hendrickson RC, Liu C, Brentjens RJ. Targeted delivery of a PD-1-blocking scFv by CAR-T cells enhances anti-tumor efficacy in vivo. Nat Biotechnol. 2018 Oct;36(9):847-856. doi: 10.1038/nbt.4195. Epub 2018 Aug 13. PMID: 30102295 PMCID: PMC6126939 [Available on 2019-02-13] DOI: 10.1038/nbt.4195
- Quintero CM, Laursen KB, Mongan NP, Luo M, Gudas LJ. CARM1 (PRMT4) Acts as a Transcriptional Coactivator during Retinoic Acid-Induced Embryonic Stem Cell Differentiation. J Mol Biol. 2018 Aug 25. pii: S0022-2836(18)30686-7. doi: 10.1016/j.jmb.2018.08.014. PMID:30153436 DOI:10.1016/j.jmb.2018.08.014
- Gala K, Li Q, Sinha A, Razavi P, Dorso M, Sanchez-Vega F, Chung YR, Hendrickson R, Hsieh JJ, Berger M, Schultz N, Pastore A, Abdel-Wahab O, Chandarlapaty S. KMT2C mediates the estrogen dependence of breast cancer through regulation of ERα enhancer function. Oncogene. 2018 Aug;37(34):4692-4710. doi: 10.1038/s41388-018-0273-5. Epub 2018 May 14. PubMed PMID: 29755131; PubMed Central PMCID: PMC6107480.
- Roberts S, Andreou C, Choi C, Donabedian P, Jayaraman M, Pratt EC, Tang J, Pérez-Medina C, Jason de la Cruz M, Mulder WJM, Grimm J, Kircher M, Reiner T. Sonophore-enhanced nanoemulsions for optoacoustic imaging of cancer. Chem Sci. 2018 May 18;9(25):5646-5657. doi: 10.1039/c8sc01706a. eCollection 2018 Jul 7. PubMed PMID: 30061998; PubMed Central PMCID: PMC6049522.
- Shamay Y, Shah J, Işık M, Mizrachi A, Leibold J, Tschaharganeh DF, Roxbury D, Budhathoki-Uprety J, Nawaly K, Sugarman JL, Baut E, Neiman MR, Dacek M, Ganesh KS, Johnson DC, Sridharan R, Chu KL, Rajasekhar VK, Lowe SW, Chodera JD, Heller DA. Quantitative self-assembly prediction yields targeted nanomedicines. Nat Mater. 2018 Apr;17(4):361-368. doi: 10.1038/s41563-017-0007-z. Epub 2018 Feb 5. PubMed PMID: 29403054; PubMed Central PMCID: PMC5930166.
- Pratt EC, Shaffer TM, Zhang Q, Drain CM, Grimm J. Nanoparticles as multimodal photon transducers of ionizing radiation. Nat Nanotechnol. 2018 Mar 26. doi: 10.1038/s41565-018-0086-2. PMID: 29581551 DOI: 10.1038/s41565-018-0086-2 .
- Tamura R, Pratt EC, Grimm J. Innovations in Nuclear Imaging Instrumentation: Cerenkov Imaging. Semin Nucl Med. 2018 Jul;48(4):359-366. doi: 10.1053/j.semnuclmed.2018.02.007. Epub 2018 Mar 16. Review. PubMed PMID: 29852945; PubMed Central PMCID: PMC6251708.
- Huang TH, Fowler F, Chen CC, Shen ZJ, Sleckman B, Tyler JK. The Histone Chaperones ASF1 and CAF-1 Promote MMS22L-TONSL-Mediated Rad51 Loading onto ssDNA during Homologous Recombination in Human Cells. Mol Cell. 2018 Mar 1;69(5):879-892.e5. doi: 10.1016/j.molcel.2018.01.031. Epub 2018 Feb 22. PubMed PMID: 29478807; PubMed Central PMCID: PMC5843376.
- Ramaswamy K, Forbes L, Minuesa G, Gindin T, Brown F, Kharas MG, Krivtsov AV, Armstrong SA, Still E, de Stanchina E, Knoechel B, Koche R, Kentsis A. Peptidomimetic blockade of MYB in acute myeloid leukemia. Nat Commun. 2018 Jan 9;9(1):110. doi: 10.1038/s41467-017-02618-6. PubMed PMID: 29317678; PubMed Central PMCID: PMC5760651.
2017 (Updated 10/2017)
Shaffer TM, Pratt EC, Grimm J. Utilizing the power of Cerenkov light with nanotechnology., Nat Nanotechnol. 2017 Feb 7;12(2):106-117. doi: 10.1038/nnano.2016.301. Review. PMID: 28167827
- Grommes C, Pastore A, Palaskas N, Tang SS, Campos C, Schartz D, Codega P, Nichol D, Clark O, Hsieh WY, Rohle D, Rosenblum M, Viale A, Tabar VS, Brennan CW, Gavrilovic IT, Kaley TJ, Nolan CP, Omuro A, Pentsova E, Thomas AA, Tsyvkin E, Noy A, Palomba ML, Hamlin P, Sauter CS, Moskowitz CH, Wolfe J, Dogan A, Won M, Glass J, Peak S, Lallana EC, Hatzoglou V, Reiner AS, Gutin PH, Huse JT, Panageas KS, Graeber TG, Schultz N, DeAngelis LM, Mellinghoff IK. Ibrutinib Unmasks Critical Role of Bruton Tyrosine Kinase in Primary CNS Lymphoma. Cancer Discov. 2017 Sep;7(9):1018-1029. doi: 10.1158/2159-8290.CD-17-0613. Epub 2017 Jun 15. PubMed PMID: 28619981; PubMed Central PMCID: PMC5581705.
- Scheinberg DA, Grimm J, Heller DA, Stater EP, Bradbury M, McDevitt MR. Advances in the clinical translation of nanotechnology. Curr Opin Biotechnol. 2017 Aug;46:66-73. doi: 10.1016/j.copbio.2017.01.002. Epub 2017 Feb 7. PMID: 28187340 PMCID: PMC5544552
- Stawowczyk M, Wellenstein MD, Lee SB, Yomtoubian S, Durrans A, Choi H, Narula N, Altorki NK, Gao D, Mittal V. Matrix Metalloproteinase 14 promotes lung cancer by cleavage of Heparin-Binding EGF-like Growth Factor. Neoplasia. 2017 Feb;19(2):55-64. doi:10.1016/j.neo.2016.11.005. Epub 2016 Dec 23. PMID: 28013056 PMCID: PMC5198728
- Walsh LA, Alvarez MJ, Sabio EY, Reyngold M, Makarov V, Mukherjee S, Lee KW, Desrichard A, Turcan S, Dalin MG, Rajasekhar VK, Chen S, Vahdat LT, Califano A, Chan TA. An Integrated Systems Biology Approach Identifies TRIM25 as a Key Determinant of Breast Cancer Metastasis. Cell Rep. 2017 Aug 15;20(7):1623-1640. doi: 10.1016/j.celrep.2017.07.052. PMID:28813674.
- Oricchio E, Katanayeva N, Donaldson MC, Sungalee S, Pasion JP, Beguelin W, Battistello E, Sanghvi VR, Jiang M, Jiang Y, Teater M, Parmigiani A, Budanov AV, Chan FC, Shah SP, Kridel R, Melnick AM, Ciriello G, Wendel HG. Genetic and epigenetic inactivation of SESTRIN1 controls mTORC1 and response to EZH2 inhibition in follicular lymphoma. Sci Transl Med. 2017 Jun 28;9(396). pii: eaak9969. doi: 10.1126/scitranslmed.aak9969. PMID:28659443 PMCID:PMC5559734.
- Song W, Filonov GS, Kim H, Hirsch M, Li X, Moon JD, Jaffrey SR. Imaging RNA polymerase III transcription using a photostable RNA-fluorophore complex. Nat Chem Biol. 2017 Sep 25. doi: 10.1038/nchembio.2477. PMID:28945233
- Backlund PS, Urbanski HF, Doll MA, Hein DW, Bozinoski M, Mason CE, Coon SL, Klein DC. Daily Rhythm in Plasma N-acetyltryptamine. J Biol Rhythms. 2017 Jun;32(3):195-211. doi: 10.1177/0748730417700458. Epub 2017 May 3. PMID:28466676.
- Budhathoki-Uprety J, Langenbacher RE, Jena PV, Roxbury D, Heller DA. A Carbon Nanotube Optical Sensor Reports Nuclear Entry via a Noncanonical Pathway. ACS Nano. 2017 Apr 25;11(4):3875-3882. doi: 10.1021/acsnano.7b00176. Epub 2017 Apr 11. PubMed PMID: 28398031; PubMed Central PMCID: PMC5511501.
2016
- Dao T, Korontsvit T, Zakhaleva V, Jarvis C, Mondello P, Oh C, Scheinberg DA. An immunogenic WT1-derived peptide that induces T cell response in the context of HLA-A*02:01 and HLA-A*24:02 molecules. Oncoimmunology. 2016 Dec 7;6(2):e1252895. doi: 10.1080/2162402X.2016.1252895. eCollection 2017. PMID:28344864 PMCID:PMC5353933
- Gold B, Roberts J, Ling Y, Lopez Quezada L, Glasheen J, Somersan-Karakaya S, Warrier T, Ballinger E, Nathan C. Visualization of the Charcoal Agar Resazurin Assay for Semi-quantitative, Medium-throughput Enumeration of Mycobacteria. J Vis Exp. 2016 Dec 14;(118). doi: 10.3791/54690. PMID: 28060290 PMCID: PMC5226417 DOI 10.3791/54690
- Culjkovic-Kraljacic B, Fernando TM, Marullo R, Calvo-Vidal N, Verma A, Yang S, Tabbo F, Gaudiano M, Zahreddine H, Goldstein RL, Patel J, Taldone T, Chiosis G, Ladetto M, Ghione P, Machiorlatti R, Elemento O, Inghirami G, Melnick A, Borden KL, Cerchietti L. Combinatorial targeting of nuclear export and translation of RNA inhibits aggressive B-cell lymphomas. Blood. 2016 Feb 18;127(7):858-68. doi: 10.1182/blood-2015-05-645069. Epub 2015 Nov 24. PMID:26603836.
- Minton DR, Fu L, Mongan NP, Shevchuk MM, Nanus DM, Gudas LJ. Role of NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex 4-Like 2 in Clear Cell Renal Cell Carcinoma. Clin Cancer Res. 2016 Jan 18. [Epub ahead of print] PMID:26783287.
- Ataie N, Xiang J, Cheng N, Brea EJ, Lu W, Scheinberg DA, Liu C, Ng HL. Structure of a TCR-Mimic Antibody with Target Predicts Pharmacogenetics. Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2016 Mar 23. doi: 10.1002/wnan.1402. [Epub ahead of print] PMID:27006133.
- Pratt EC, Shaffer TM, Grimm J. Nanoparticles and radiotracers: advances toward radionanomedicine. Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2016 Mar 23. doi: 10.1002/wnan.1402. [Epub ahead of print] PMID:27006133.
- Roxbury D, Jena PV, Shamay Y, Horoszko CP, Heller DA. Cell Membrane Proteins Modulate the Carbon Nanotube Optical Bandgap via Surface Charge Accumulation. ACS Nano. 2016 Jan 26;10(1):499-506. doi: 10.1021/acsnano.5b05438. Epub 2015 Dec 11. PMID:26654246.
- Paresi CJ, Liu Q, Li YM. Benzimidazole covalent probes and the gastric H+/K+-ATPase as a model system for protein labeling in a copper-free setting. Mol Biosyst. 2016 Mar 8. PMID:26952080 .
2015
- Alam NM, Mills WC, Wong AA, Douglas RM, Szeto HH, Prusky GT. A mitochondrial therapeutic reverses visual decline in mouse models of diabetes. Dis Model Mech. 2015 Jul 1;8(7):701-10. doi: 10.1242/dmm.020248. Epub 2015 Apr 23. PMID:26035391
- Williams RM, Shah J, Ng BD, Minton DR, Gudas LJ, Park CY, Heller DA. Mesoscale nanoparticles selectively target the renal proximal tubule epithelium. Nano Lett. 2015 Apr 8;15(4):2358-64. doi: 10.1021/nl504610d. Epub 2015 Mar 26. PMID:25811353
- Fu L, Minton DR, Zhang T, Nanus DM, Gudas LJ. Genome-Wide Profiling of TRACK Kidneys Shows Similarity to the Human ccRCC Transcriptome. Mol Cancer Res. 2015 May;13(5):870-8. doi: 10.1158/1541-7786.MCR-14-0423. Epub 2015 Feb 25. PMID:25715653
- Minton DR, Fu L, Chen Q, Robinson BD, Gross SS, Nanus DM, Gudas LJ. Analyses of the transcriptome and metabolome demonstrate that HIF1a mediates altered tumor metabolism in clear cell renal cell carcinoma. PLoS One. 2015 Apr 1;10(4):e0120649. doi: 10.1371/journal.pone.0120649. eCollection 2015. PMID:25830305
- Mets E, Van der Meulen J, Van Peer G, Boice M, Mestdagh P, Van de Walle I, Lammens T, Goossens S, De Moerloose B, Benoit Y, Van Roy N, Clappier E, Poppe B, Vandesompele J, Wendel HG, Taghon T, Rondou P, Soulier J, Van Vlierberghe P, Speleman F. MicroRNA-193b-3p acts as a tumor suppressor by targeting the MYB oncogene in T-cell acute lymphoblastic leukemia. Leukemia. 2015 Apr;29(4):798-806. doi: 10.1038/leu.2014.276. Epub 2014 Sep 18. PMID:25231743
- Maksymiuk C, Balakrishnan A, Bryk R, Rhee KY, Nathan CF. E1 of a-ketoglutarate dehydrogenase defends Mycobacterium tuberculosis against glutamate anaplerosis and nitroxidative stress. Proc Natl Acad Sci U S A. 2015 Oct 27;112(43):E5834-43. doi: 10.1073/pnas.1510932112. Epub 2015 Oct 1. PMID:26430237
- Maksymiuk C, Ioerger T, Balakrishnan A, Bryk R, Rhee K, Sacchettini J, Nathan C. Comparison of transposon and deletion mutants in Mycobacterium tuberculosis: The case of rv1248c, encoding 2-hydroxy-3-oxoadipate synthase. Tuberculosis (Edinb). 2015 Dec;95(6):689-94. doi: 10.1016/j.tube.2015.08.009. Epub 2015 Oct 19. PMID:26547230
- Dubrovsky L, Dao T, Gejman RS, Brea EJ, Chang AY, Oh CY, Casey E, Pankov D, Scheinberg DA. T cell receptor mimic antibodies for cancer therapy. Oncoimmunology. 2015 Jun 1;5(1):e1049803. PMID:26942058
- Gold B, Roberts J, Ling Y, Quezada LL, Glasheen J Ballinger E, Somersan-Karakaya S, Warrier T, Warren JD, Nathan C. Rapid, Semiquantitative Assay To Discriminate among Compounds with Activity against Replicating or Nonreplicating Mycobacterium tuberculosis. Antimicrob Agents Chemother. 2015 Oct;59(10):6521-38. doi: 10.1128/AAC.00803-15. Epub 2015 Aug 3. PMID:26239979.
- Ran L, Sirota I, Cao Z, Murphy D, Chen Y, Shukla S, Xie Y, Kaufmann MC, Gao D, Zhu S, Rossi F, Wongvipat J, Taguchi T, Tap WD, Mellinghoff IK, Besmer P, Antonescu CR, Chen Y, Chi P. Combined inhibition of MAP kinase and KIT signaling synergistically destabilizes ETV1 and suppresses GIST tumor growth. Cancer Discov. 2015 Mar;5(3):304-15. doi: 10.1158/2159-8290.CD-14-0985. Epub 2015 Jan 8. PMID: 25572173
- Gertsik N, Chiu D,Li YM. Complex regulation of y-secretase: from obligatory to modulatory subunits. Front Aging Neurosci. 2015 Jan 6;6:342. doi: 10.3389/fnagi.2014.00342. eCollection 2014. Review.
- Matarlo JS, Evans CE, Sharma I, Lavaud LJ, Ngo SC, Shek R, Rajashankar KR, French JB, Tan DS, Tonge PJ. Mechanism of MenE inhibition by acyl-adenylate analogues and discovery of novel antibacterial agents. Biochemistry. 2015 Oct 27;54(42):6514-24. doi: 10.1021/acs.biochem.5b00966. Epub 2015 Oct 15. PMID:26394156
- Culley KL1, Dragomir CL, Chang J, Wondimu EB, Coico J, Plumb DA, Otero M, Goldring MB. Mouse models of osteoarthritis: surgical model of posttraumatic osteoarthritis induced by destabilization of the medial meniscus.Methods Mol Biol. 2015;1226:143-73. doi: 10.1007/978-1-4939-1619-1_12.
2014
- Gudas LJ, Fu L, Minton DR, Mongan NP, Nanus DM. The role of HIF1a in renal cell carcinoma tumorigenesis. J Mol Med (Berl). 2014 Aug;92(8):825-36. doi: 10.1007/s00109-014-1180-z. Epub 2014 Jun 12. PMID:24916472
- Liu B, Zupan B, Laird E, Klein S, Gleason G, Bozinoski M, Gal Toth J, Toth M. Maternal hematopoietic TNF, via milk chemokines, programs hippocampal development and memory. Nat Neurosci. 2014 Jan;17(1):97-105. doi: 10.1038/nn.3596. Epub 2013 Dec 1. PMID:24292233
- Mets E, Van Peer G, Van der Meulen J, Boice M, Taghon T, Goossens S, Mestdagh P1, Benoit Y, De Moerloose B, Van Roy N, Poppe B, Vandesompele J, Wendel HG, Van Vlierberghe P, Speleman F, Rondou P. MicroRNA-128-3p is a novel oncomiR targeting PHF6 in T-cell acute lymphoblastic leukemia. Haematologica. 2014 Aug;99(8):1326-33. doi: 10.3324/haematol.2013.099515. Epub 2014 Jun 3. PMID:24895337
- Sanghvi VR, Mavrakis KJ, Van der Meulen J, Boice M, Wolfe AL, Carty M, Mohan P, Rondou P, Socci ND, Benoit Y, Taghon T, Van Vlierberghe P, Leslie CS, Speleman F, Wendel HG. Characterization of a set of tumor suppressor microRNAs in T cell acute lymphoblastic leukemia. Sci Signal. 2014 Nov 18;7(352):ra111. doi: 10.1126/scisignal.2005500. PMID:25406379
- Maguire WF, McDevitt MR, Smith-Jones PM, Scheinberg DA. Efficient 1-step radiolabeling of monoclonal antibodies to high specific activity with 225Ac for a-particle radioimmunotherapy of cancer. J Nucl Med. 2014 Sep;55(9):1492-8. doi: 10.2967/jnumed.114.138347. Epub 2014 Jun 30. PMID:24982438
- Villa JC, Chiu D, Brandes AH, Escorcia FE, Villa CH, Maguire WF, Hu CJ, de Stanchina E, Simon MC, Sisodia SS, Scheinberg DA, Li YM. Nontranscriptional role of Hif-1a in activation of Y-secretase and notch signaling in breast cancer. Cell Rep. 2014 Aug 21;8(4):1077-92. doi: 10.1016/j.celrep.2014.07.028. Epub 2014 Aug 14. PMID:25131208
- Mulvey JJ, Feinberg EN, Alidori S, McDevitt MR, Heller DA, Scheinberg DA. Synthesis, pharmacokinetics, and biological use of lysine-modified single-walled carbon nanotubes. Int J Nanomedicine. 2014 Sep 4;9:4245-55. doi: 10.2147/IJN.S66050. eCollection 2014. PMID:25228803
- Dubrovsky L, Pankov D, Brea EJ, Dao T, Scott A, Yan S, O'Reilly RJ, Liu C, Scheinberg DA. A TCR-mimic antibody to WT1 bypasses tyrosine kinase inhibitor resistance in human BCR-ABL+ leukemias. Elife. 2014 May 19;3:e02283. doi: 10.7554/eLife.02283. PMID: 24842876
- Verdon G, Oh S, Serio RN, Boudker O. Coupled ion binding and structural transitions along the transport cycle of glutamate transporters. Elife. 2014 May 19;3:e02283. doi: 10.7554/eLife.02283. PMID: 24842876
- Vivanco I, Chen ZC, Tanos B, Oldrini B, Hsieh WY, Yannuzzi N, Campos C, Mellinghoff IK. A kinase-independent function of AKT promotes cancer cell survival. Elife. 2014 Dec 31;3. doi: 10.7554/eLife.03751. PMID: 25551293
- Peng X, Thierry-Mieg J, Thierry-Mieg D, Nishida A, Pipes L, Bozinoski M, Thomas MJ, Kelly S, Weiss JM, Raveendran M, Muzny D, Gibbs RA, Rogers J, Schroth GP, Katze MG, Mason CE. Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). Nucleic Acids Res. 2015 Jan;43(Database issue):D737-42. doi: 10.1093/nar/gku1110. Epub 2014 Nov 11.
- Villa JC, Chiu D, Brandes AH, Escorcia FE, Villa CH, Maguire WF, Hu CJ, de Stanchina E, Simon MC, Sisodia SS, Scheinberg DA, Li YM. Nontranscriptional role of Hif-1a in activation of y-secretase and notch signaling in breast cancer. Cell Rep. 2014 Aug 21;8(4):1077-92. doi: 10.1016/j.celrep.2014.07.028. Epub 2014 Aug 14.
- Laird E, Bozinoski M, Liu B, Zupan B, , Klein S, Gleason G, , Gal Toth J, Toth M, Maternal hematopoietic TNF, via milk chemokines, programs hippocampal development and memory. Nat Neurosci. 2014 Jan;17(1):97-105. doi: 10.1038/nn.3596. Epub 2013 Dec 1.
- Paresi CJ, Liu Q, Li YM. Chemical synthesis of the ATAD2 bromodomain.. Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):2891-6. doi: 10.1073/pnas.1400556111. Epub 2014 Feb 10.PMID:24516155
2013
- Birk AV, Liu S, Soong Y, Mills W, Singh P, Warren JD, Seshan SV, Pardee JD, Szeto HH. The mitochondrial-targeted compound SS-31 re-energizes ischemic mitochondria by interacting with cardiolipin. J Am Soc Nephrol. 2013 Jul;24(8):1250-61. doi: 10.1681/ASN.2012121216. Epub 2013 Jul 11. PMID:23813215
- Maksymiuk C, Balakrishnan A, Wu YT, Wong CH, Masquelin T, Hipskind P, Lima CD, Nathan C . Lipoamide channel-binding sulfonamides selectively inhibit mycobacterial lipoamide dehydrogenase. Biochemistry. 2013 Dec 23;52(51):9375-84. doi: 10.1021/bi401077f. Epub 2013 Nov 26. PMID:24251446
- Scheinberg DA, McDevitt MR, Dao T, Mulvey JJ, Feinberg E, Alidori S. Carbon nanotubes as vaccine scaffolds. Adv Drug Deliv Rev. 2013 Dec;65(15):2016-22. doi: 10.1016/j.addr.2013.07.013. Epub 2013 Jul 27. PMID:23899863.
- Mulvey JJ, Villa CH, McDevitt MR, Escorcia FE, Casey E, Scheinberg DA. Self-assembly of carbon nanotubes and antibodies on tumours for targeted amplified delivery. Nat Nanotechnol. 2013 Oct;8(10):763-71. doi: 10.1038/nnano.2013.190. Epub 2013 Sep 29. PMID:24077028.
- Rosenfeld GE,Mercer EJ, Mason CE, Evans T. Small heat shock proteins Hspb7 and Hspb12 regulate early steps of cardiac morphogenesis. Dev Biol. 2013 Sep 15;381(2):389-400. doi: 10.1016/j.ydbio.2013.06.025. Epub 2013 Jul 11. PMID:23850773.
- Jeng PS, Cheng EH. Cancer therapeutics: Pulling the plug on BCL-X(L). Nat Chem Biol. 2013 Jun;9(6):351-2. doi: 10.1038/nchembio.1256. PMID:23689630.
2012
- Pipes L, Li S, Bozinoski M, Palermo R, Peng X, Blood P, Kelly S, Weiss JM, Thierry-Mieg J, Thierry-Mieg D, Zumbo P, Chen R, Schroth GP, Mason CE, Katze MG. The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics. Nucleic Acids Res. 2013 Jan;41(Database issue):D906-14. doi: 10.1093/nar/gks1268. Epub 2012 Nov 29. PMID: 23203872 .
- Wurst JM, Verano AL, Tan DS. Stereoselective synthesis of acortatarins A and B. Org Lett. 2012 Sep 7;14(17):4442-5. doi: 10.1021/ol3019456. Epub 2012 Aug 27.
- Tseng HM, Shum D, Bhinder B, Escobar S, Veomett NJ, Tomkinson AE, Gin DY, Djaballah H, Scheinberg DA. A high-throughput scintillation proximity-based assay for human DNA ligase IV. Assay Drug Dev Technol. 2012 Jun;10(3):235-49. doi: 10.1089/adt.2011.0404.
- Ying SW, Kanda VA, Hu Z, Purtell K, King EC, Abbott GW, Goldstein PA. Targeted deletion of Kcne2 impairs HCN channel function in mouse thalamocortical circuits. PLoS One. 2012;7(8):e42756. doi: 10.1371/journal.pone.0042756.
- Purtell K, Paroder-Belenitsky M, Reyna-Neyra A, Nicola JP, Koba W, Fine E, Carrasco N, Abbott GW. The KCNQ1-KCNE2 K+ channel is required for adequate thyroid I- uptake. FASEB J. 2012 Aug;26(8):3252-9. doi: 10.1096/fj.12-206110.
- Bazzoli E, Pulvirenti T, Oberstadt MC, Perna F, Wee B, Schultz N, Huse JT, Fomchenko EI, Voza F, Tabar V, Brennan CW, Deangelis LM, Nimer SD, Holland EC, Squatrito M. MEF Promotes Stemness in the Pathogenesis of Gliomas. Cell Stem Cell. 2012 Dec 7;11(6):836-844. doi: 10.1016/j.stem.2012.09.012.
- Wang R, Islam K, Liu Y, Zheng W, Tang H, Lailler N, Blum G, Deng H, Luo M. Profiling Genome-wide Chromatin Methylation with Engi-neered Posttranslation Apparatus within Living Cells.J Am Chem Soc. 2012 Dec 17. [Epub ahead of print]
- Xu H, Menendez S, Schlegelberger B, Bae N, Aplan PD, Göhring G, Deblasio TR, Nimer SD. Loss of p53 accelerates the complications of myelodysplastic syndrome in a NUP98-HOXD13-driven mouse model. Blood. 2012 Oct 11;120(15):3089-97. doi: 10.1182/blood-2012-01-405332.
- Asai T, Liu Y, Di Giandomenico S, Bae N, Ndiaye-Lobry D, Deblasio A, Menendez S, Antipin Y, Reva B, Wevrick R, Nimer SD. Necdin, a p53 target gene, regulates the quiescence and response to genotoxic stress of hematopoietic stem/progenitor cells. Blood. 2012 Aug 23;120(8):1601-12. doi: 10.1182/blood-2011-11-393983.
- Crump CJ, Castro SV, Wang F, Pozdnyakov N, Ballard TE, Sisodia SS, Bales KR, Johnson DS, Li YM. BMS-708,163 targets presenilin and lacks notch-sparing activity. Biochemistry. 2012 Sep 18;51(37):7209-11. doi: 10.1021/bi301137h.
- Vivanco I, Robins HI, Rohle D, Campos C, Grommes C, Nghiemphu PL, Kubek S, Oldrini B, Chheda MG, Yannuzzi N, Tao H, Zhu S, Iwanami A, Kuga D, Dang J, Pedraza A, Brennan CW, Heguy A, Liau LM, Lieberman F, Yung WK, Gilbert MR, Reardon DA, Drappatz J, Wen PY, Lamborn KR, Chang SM, Prados MD, Fine HA, Horvath S, Wu N, Lassman AB, DeAngelis LM, Yong WH, Kuhn JG, Mischel PS, Mehta MP, Cloughesy TF, Mellinghoff IK. Differential sensitivity of glioma- versus lung cancer-specific EGFR mutations to EGFR kinase inhibitors. Cancer Discov. 2012 May;2(5):458-71. doi: 10.1158/2159-8290.CD-11-0284.
- Lu C, Ward PS, Kapoor GS, Rohle D, Turcan S, Abdel-Wahab O, Edwards CR, Khanin R, Figueroa ME, Melnick A, Wellen KE, O'Rourke DM, Berger SL, Chan TA, Levine RL, Mellinghoff IK, Thompson CB. IDH mutation impairs histone demethylation and results in a block to cell differentiation. Nature. 2012 Feb 15;483(7390):474-8. doi: 10.1038/nature10860.
- Turcan S, Rohle D, Goenka A, Walsh LA, Fang F, Yilmaz E, Campos C, Fabius AW, Lu C, Ward PS, Thompson CB, Kaufman A, Guryanova O, Levine R, Heguy A, Viale A, Morris LG, Huse JT, Mellinghoff IK, Chan TA. IDH1 mutation is sufficient to establish the glioma hypermethylator phenotype. Nature. 2012 Feb 15;483(7390):479-83. doi: 10.1038/nature10866.
- Haro KJ, Sheth A, Scheinberg DA. Dysregulation of IRP1-Mediated Iron Metabolism Causes Gamma Ray-specific Radioresistance in Leukemia Cells. PLoS One. 2012;7(11):e48841. doi: 10.1371/journal.pone.0048841.
- Wurst JM, Verano AL, Tan DS. Stereoselective synthesis of acortatarins A and B. Org Lett. 2012 Sep 7;14(17):4442-5. doi: 10.1021/ol3019456.
- Islam K, Bothwell I, Chen Y, Sengelaub C, Wang R, Deng H, Luo M. Bioorthogonal Profiling of Protein Methylation Using Azido Derivative of S-Adenosyl-l-methionine. J Am Chem Soc. 2012 Apr 4;134(13):5909-15.
- Chen J, Levin LR, Buck J. Role of soluble adenylyl cyclase in the heart. Am J Physiol Heart Circ Physiol. 2012 Feb;302(3):H538-43.
- Topal H, Fulcher NB, Bitterman J, Salazar E, Buck J, Levin LR, Cann MJ, Wolfgang MC, Steegborn C. Crystal structure and regulation mechanisms of the CyaB adenylyl cyclase from the human pathogen Pseudomonas aeruginosa. J Mol Biol. 2012 Feb 17;416(2):271-86.
- Chau DM, Crump CJ, Villa JC, Scheinberg DA, Li YM. Familial Alzheimer disease Presenilin-1 mutations alter the active site conformation of y-secretase. J Biol Chem. 2012 May 18;287(21):17288-96. doi: 10.1074/jbc.M111.300483.
- Crump CJ, Am Ende CW, Eric Ballard T, Pozdnyakov N, Pettersson M, Chau DM, Bales KR, Li YM, Johnson DS. Development of clickable active site-directed photoaffinity probes for y-secretase. Bioorg Med Chem Lett. 2012 Apr 15;22(8):2997-3000.
- Marcinkiewicz K, Scotland KB , Boorjian SA, Nilsson EM, Persson JL, Abrahamsson PA, Allegrucci C, Hughes IA, Gudas LJ, Mongan NP. The androgen receptor and stem cell pathways in prostate and bladder cancers (review). Int J Oncol. 2012 Jan;40(1):5-12. doi: 10.3892/ijo.2011.1212.
- Bath KG, Jing DQ, Dincheva I, Neeb CC, Pattwell SS, Chao MV, Lee FS, Ninan I. BDNF Val66Met impairs fluoxetine-induced enhancement of adult hippocampus plasticity. Neuropsychopharmacology. 2012 Apr;37(5):1297-304. doi: 10.1038/npp.2011.318.
- Dincheva I, Glatt CE, Lee FS. Impact of the BDNF Val66Met Polymorphism on Cognition: Implications for Behavioral Genetics. Neuroscientist. 2012 Oct;18(5):439-51
2011
- Mallikaratchy PR, Ruggiero A, Gardner JR, Kuryavyi V, Maguire WF, Heaney ML, McDevitt MR, Patel DJ, Scheinberg DA. A multivalent DNA aptamer specific for the B-cell receptor on human lymphoma and leukemia. Nucleic Acids Res. 2011 Mar;39(6):2458-69. doi: 10.1093/nar/gkq996. Epub 2010 Oct 28. PMID:21030439.
- Vorlová S, Rocco G, Lefave CV, Jodelka FM, Hess K, Hastings ML, Henke E, Cartegni L. Induction of antagonistic soluble decoy receptor tyrosine kinases by intronic polyA activation. Mol Cell. 2011 Sep 16;43(6):927-39. doi: 10.1016/j.molcel.2011.08.009.
- Lee YS, Tresguerres M, Hess K, Marmorstein LY, Levin LR, Buck J, Marmorstein AD. Regulation of anterior chamber drainage by bicarbonate-sensitive soluble adenylyl cyclase in the ciliary body. J Biol Chem. 2011 Dec 2;286(48):41353-8.
- Palaskas N, Larson SM, Schultz N, Komisopoulou E, Wong J, Rohle D, Campos C, Yannuzzi N, Osborne JR, Linkov I, Kastenhuber ER, Taschereau R, Plaisier SB, Tran C, Heguy A, Wu H, Sander C, Phelps ME, Brennan C, Port E, Huse JT, Graeber TG, Mellinghoff IK. 18F-fluorodeoxy-glucose positron emission tomography marks MYC-overexpressing human basal-like breast cancers. Cancer Res. 2011 Aug 1;71(15):5164-74. doi: 10.1158/0008-5472.CAN-10-4633.
- Wee B, Charles N, Holland EC. Animal models to study cancer-initiating cells from glioblastoma. Front Biosci. 2011 Jun 1;17:2243-58.
- Wang R, Ibáñez G, Islam K, Zheng W, Blum G, Sengelaub C, Luo M. Formulating a fluorogenic assay to evaluate S-adenosyl-L-methionine analogues as protein methyltransferase cofactors. Mol Biosyst. 2011 Nov;7(11):2970-81.
- Wang R, Zheng W, Yu H, Deng H, Luo M. Labeling substrates of protein arginine methyltransferase with engineered enzymes and matched S-adenosyl-L-methionine analogues. J Am Chem Soc. 2011 May 25;133(20):7648-51.
- Crump CJ, Fish BA, Castro SV, Chau DM, Gertsik N, Ahn K, Stiff C, Pozdnyakov N, Bales KR, Johnson DS, Li YM. Piperidine acetic acid based y-secretase modulators directly bind to Presenilin-1. ACS Chem Neurosci. 2011 Dec 21;2(12):705-710.
- Crump CJ, Johnson DS, Li YM. Target of y-secretase modulators, presenilin marks the spot. EMBO J. 2011 Nov 30;30(23):4696-8. doi: 10.1038/emboj.2011.410.
- Nuriel T, Hansler A, Gross SS. Protein nitrotryptophan: formation, significance and identification. J Proteomics. 2011 Oct 19;74(11):2300-12
- Hashikawa-Hobara N, Chan NY, Levi R. Histamine H3-receptor activation reduces the expression of neuronal angiotensin AT1-receptors in the heart. J Pharmacol Exp Ther. 2011 Oct 19. [Epub ahead of print]
- Cen Y, Youn DY, Sauve AA. Advances in characterization of human sirtuin isoforms: chemistries, targets and therapeutic applications. Curr Med Chem. 2011;18(13):1919-35.
- Kanda VA, Purtell K, Abbott GW. Protein kinase C downregulates I(Ks) by stimulating KCNQ1-KCNE1 potassium channel endocytosis. Heart Rhythm. 2011 Oct;8(10):1641-7. Epub 2011 May 10.
- Kanda VA, Lewis A, Xu X, Abbott GW. KCNE1 and KCNE2 Provide a Checkpoint Governing Voltage-Gated Potassium Channel α-Subunit Composition. Biophys J. 2011 Sep 21;101(6):1364-75. Epub 2011 Sep 20.
- Kanda VA, Lewis A, Xu X, Abbott GW. KCNE1 and KCNE2 Inhibit Forward Trafficking of Homomeric N-Type Voltage-Gated Potassium Channels. Biophys J. 2011 Sep 21;101(6):1354-63. Epub 2011 Sep 20.
- Lefave CV, Squatrito M, Vorlova S, Rocco GL, Brennan CW, Holland EC, Pan YX, Cartegni L. Splicing factor hnRNPH drives an oncogenic splicing switch in gliomas. EMBO J. 2011 Sep 13;30(19):4084-97. doi: 10.1038/emboj.2011.259.
- Roepke TK, Kanda VA, Purtell K, King EC, Lerner DJ, Abbott GW. KCNE2 forms potassium channels with KCNA3 and KCNQ1 in the choroid plexus epithelium. FASEB J. 2011 Aug 22. [Epub ahead of print]
- Gonsalves FC, Klein K, Carson BB, Katz S, Ekas LA, Evans S, Nagourney R, Cardozo T, Brown AM, DasGupta R. An RNAi-based chemical genetic screen identifies three small-molecule inhibitors of the Wnt/wingless signaling pathway. Proc Natl Acad Sci U S A. 2011 Apr 12;108(15):5954-63.
- Carbonaro M, O'Brate A, Giannakakou P. Microtubule disruption targets HIF-1 mRNA to cytoplasmic P-bodies for translational repression. J Cell Biol. 2011 Jan 10;192(1):83-99.
- Cen Y, Falco JN, Xu P, Youn DY, Sauve AA. Mechanism-based affinity capture of sirtuins. Org Biomol Chem. 2011 Feb 21;9(4):987-93.
- Asai T, Liu Y, Bae N, Nimer SD. The p53 tumor suppressor protein regulates hematopoietic stem cell fate. J Cell Physiol. 2011 Sep;226(9):2215-21. doi: 10.1002/jcp.22561.
- Ramos-Espiritu LS, Hess KC, Buck J, Levin LR. The soluble guanylyl cyclase activator YC-1 increases intracellular cGMP and cAMP via independent mechanisms in INS-1E cells. J Pharmacol Exp Ther. 2011 Sep;338(3):925-31.
2010
- Ibez G, McBean JL, Astudillo YM, Luo M. An enzyme-coupled ultrasensitive luminescence assay for protein methyltransferases. Anal Biochem. 2010 Jun 15;401(2):203-10.
- French JB, Cen Y, Vrablik TL, Xu P, Allen E, Hanna-Rose W, Sauve AA. Characterization of nicotinamidases: steady state kinetic parameters, classwide inhibition by nicotinaldehydes, and catalytic mechanism.Biochemistry. 2010 Dec 14;49(49):10421-39.
- Diani-Moore S, Ram P, Li X, Mondal P, Youn DY, Sauve AA, Rifkind AB. Identification of the aryl hydrocarbon receptor target gene TiPARP as a mediator of suppression of hepatic gluconeogenesis by 2,3,7,8-tetrachlorodibenzo-p-dioxin and of nicotinamide as a corrective agent for this effect. J Biol Chem. 2010 Dec 10;285(50):38801-10.
- Roepke TK, King EC, Purtell K, Kanda VA, Lerner DJ, Abbott GW. Genetic dissection reveals unexpected influence of {beta} subunits on KCNQ1 K+ channel polarized trafficking in vivo. FASEB J. 2010 Nov 17. [Epub ahead of print]
- Escorcia FE, Henke E, McDevitt MR, Villa CH, Smith-Jones P, Blasberg RG, Benezra R, Scheinberg DA. Selective killing of tumor neovasculature paradoxically improves chemotherapy delivery to tumors. Cancer Res. 2010 Nov 15;70(22):9277-86.
- Purtell K, Roepke TK, Abbott GW. Cardiac arrhythmia and thyroid dysfunction: a novel genetic link. Int J Biochem Cell Biol. 2010 Nov;42(11):1767-70.
- Ruggiero A, Villa CH, Holland JP, Sprinkle SR, May C, Lewis JS, Scheinberg DA, McDevitt MR. Imaging and treating tumor vasculature with targeted radiolabeled carbon nanotubes Int J Nanomedicine. 2010 Oct 5;5:783-802.
- Kashyap V, Gudas LJ, Brenet F, Funk P, Viale A, Scandura JM. Epigenomic reorganization of the clustered hox genes in embryonic stem cells induced by retinoic acid. J Biol Chem. 2010 Nov 18. [Epub ahead of print]
- Tian Y, Crump CJ, Li YM. Dual Role of {alpha}-Secretase Cleavage in the Regulation of {gamma}-Secretase Activity for Amyloid Production. J Biol Chem. 2010;285(42):32549-56.
- Seideman JH, Shum D, Djaballah H, Scheinberg DA. A high-throughput screen for alpha particle radiation protectants. Assay Drug Dev Technol. 2010 Oct;8(5):602-14
- Ahn K, Shelton CC, Tian Y, Zhang X, Gilchrist ML, Sisodia SS, Li YM. Activation and intrinsic {gamma}-secretase activity of presenilin 1. Proc Natl Acad Sci U S A. 2010 Nov 29. [Epub ahead of print]
- Escobar-Alvarez S, Gardner J, Sheth A, Manfredi G, Yang G, Ouerfelli O, Heaney ML, Scheinberg DA. Inhibition of Human Peptide Deformylase Disrupts Mitochondrial Function. Mol Cell Biol. 2010Nov;30(21):5099-109.
- Halilovic E, She QB, Ye Q, Pagliarini R, Sellers WR, Solit DB, Rosen N. PIK3CA Mutation Uncouples Tumor Growth and Cyclin D1 Regulation from MEK/ERK and Mutant KRAS Signaling. Cancer Res. 2010 Sep 1;70(17):6804-14. [Epub 2010 Aug 10].
- Koda K, Salazar-Rodriguez M, Corti F, Chan NY, Estephan R, Silver RB, Mochly-Rosen D, Levi R. (2010) Aldehyde Dehydrogenase Activation Prevents Reperfusion Arrhythmias by Inhibiting Local Renin Release From Cardiac Mast Cells. Circulation. 2010 Aug 24;122(8):771-81.
- Truman JP, Garc�a-Barros M, Kaag M, Hambardzumyan D, Stancevic B, Chan M, Fuks Z, Kolesnick R, Haimovitz-Friedman A. Endothelial membrane remodeling is obligate for anti-angiogenic radiosensitization during tumor radiosurgery. PLoS One. 2010 Aug 19;5(8):e12310.
- Wang R, Wang G, Ricard MJ, Ferris B, Strulovici-Barel Y, Salit J, Hackett NR, Gudas LJ, Crystal RG. (2010) Smoking-induced Up-regulation of AKR1B10 Expression in the Airway Epithelium of Healthy Individuals. Chest. 2010 Dec;138(6):1402-10.
- Mesicek J, Lee H, Feldman T, Jiang X, Skobeleva A, Berdyshev EV, Haimovitz-Friedman A, Fuks Z, Kolesnick R. (2010) Ceramide synthases 2, 5, and 6 confer distinct roles in radiation-induced apoptosis in HeLa cells. Cell Signal. 2010 Sep;22(9):1300-7.
- Xu G, Paige JS, Jaffrey SR. Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling. Nat Biotechnol. 2010 Aug;28(8):868-73.
- Harkcom WT, Abbott GW. Emerging concepts in the pharmacogenomics of arrhythmias: ion channel trafficking. Expert Rev Cardiovasc Ther. 2010 Aug;8(8):1161-73. Review.
- Kashyap V, Gudas LJ. Epigenetic regulatory mechanisms distinguish retinoic acid mediated transcriptional responses in stem cells and fibroblasts. J Biol Chem. 2010;285(19):14534-48.
- Ruggiero A, Villa CH, Bander E, Rey DA, Bergkvist M, Batt CA, Manova-Todorova K, Deen WM, Scheinberg DA, McDevitt MR. Paradoxical glomerular filtration of carbon nanotubes Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12369-74.
- Roepke TK, Purtell K, King EC, La Perle KM, Lerner DJ, Abbott GW. Targeted deletion of Kcne2 causes gastritis cystica profunda and gastric neoplasia PLoS One. 2010 Jul 6;5(7):e11451.
- Placanica L, Chien JW, Li YM. Characterization of an atypical gamma-secretase complex from hematopoietic origin. Biochemistry. 2010 Apr 6;49(13):2796-804
- Shmelkov SV, Hormigo A, Jing D, Proenca CC, Bath KG, Milde T, Shmelkov E, Kushner JS, Baljevic M, Dincheva I, Murphy AJ, Valenzuela DM, Gale NW, Yancopoulos GD, Ninan I, Lee FS, Rafii S. Slitrk5 deficiency impairs corticostriatal circuitry and leads to obsessive-compulsive-like behaviors in mice. Nat Med. 2010 May;16(5):598-602.
- Scheinberg DA, Villa CH, Escorcia FE, McDevitt MR. Conscripts of the infinite armada: systemic cancer therapy using nanomaterials. Nat Rev Clin Oncol. 2010 May;7(5):266-76.
- Stancevic B, Kolesnick R. Ceramide-rich platforms in transmembrane signaling. FEBS Lett. 2010 May 3;584(9):1728-40.
- Choi E, Abbott GW. A shared mechanism for lipid- and beta-subunit-coordinated stabilization of the activated K+ channel voltage sensor.FASEB J. 2010 May;24(5):1518-24.
- Tian Y, Bassit B, Chau D, Li YM. An APP inhibitory domain containing the Flemish mutation residue modulates gamma-secretase activity for Abeta production Nat Struct Mol Biol. 2010 Feb;17(2):151-8.
- Gleason G, Liu B, Bruening S, Zupan B, Auerbach A, Mark W, Oh JE, Gal-Toth J, Lee F, Toth M. The serotonin1A receptor gene as a genetic and prenatal maternal environmental factor in anxiety. Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7592-7.
- Vivanco I, Rohle D, Versele M, Iwanami A, Kuga D, Oldrini B, Tanaka K, Dang J, Kubek S, Palaskas N, Hsueh T, Evans M, Mulholland D, Wolle D, Rajasekaran S, Rajasekaran A, Liau LM, Cloughesy TF, Dikic I, Brennan C, Wu H, Mischel PS, Perera T, Mellinghoff IK. The phosphatase and tensin homolog regulates epidermal growth factor receptor (EGFR) inhibitor response by targeting EGFR for degradation. Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6459-64
- Deeb RS, Cheung C, Nuriel T, Lamon BD, Upmacis RK, Gross SS, Hajjar DP. Physical evidence for substrate binding in preventing cyclooxygenase inactivation under nitrative stress. J Am Chem Soc. 2010 Mar 24;132(11):3914-22.
- Wyerbacher AR, Xu Q, Tamasdan C, Shin SJ, Inturrisi CE. N-Methyl-D-aspartate receptor (NMDAR) independent maintenance of inflammatory pain. Pain. 2010 Feb;148(2):237-46.
- Charles N, Ozawa T, Squatrito M, Bleau AM, Brennan CW, Hambardzumyan D, Holland EC. Perivascular nitric oxide activates notch signaling and promotes stem-like character in PDGF-induced glioma cells.Cell Stem Cell. 2010 Feb 5;6(2):141-52.
- Rotolo JA, Mesicek J, Maj J, Truman JP, Haimovitz-Friedman A, Kolesnick R, Fuks Z. Regulation of ceramide synthase-mediated crypt epithelium apoptosis by DNA damage repair enzymes. Cancer Res. 2010 Feb 1;70(3):957-67.
- Charles NA, Holland EC. TRRAP and the maintenance of stemness in gliomas. Cell Stem Cell. 2010 Jan 8;6(1):6-7.
- Tresguerres M, Parks SK, Salazar E, Levin LR, Goss GG, Buck J. Bicarbonate-sensing soluble adenylyl cyclase is an essential sensor for acid/base homeostasis. Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):442-7.
- Kolesnick R, van den Brink M, Heller G, Rotolo JA. Response: Sample size and statistical comparisons of GVHD rates in pediatric Niemann-Pick disease patients. Blood. 2010 Jan 14;115(2):436.
2009
- Shelton CC, Zhu L, Chau D, Yang L, Wang R, Djaballah H, Zheng H, Li YM. Modulation of gamma-secretase specificity using small molecule allosteric inhibitors. (2009) Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20228-33.
- Choi E, Abbott GW. A shared mechanism for lipid- and {beta}-subunit-corrdinated stabilization of the activated K+ channel voltage sensor. (2009) FASEB J. 2009 Dec 29 [Epub ahead of print]
- Shelton CC, Tian Y, Frattini MG, Li YM. A A miniaturized 1536-well format gamma-secretase assay. (2009) Assay Drug Dev Technol. 2009 Oct;7(5):461-70.
- Roepke TK, King EC, Reyna-Neyra A, Paroder M, Purtell K, Koba W, Fine E, Lerner DJ, Carrasco N, Abbott GW. (2009) Kcne2 deletion uncovers its critical role in thyroid hormone biosynthesis. Nature Medicine 2009 Oct;15(10):1186-94.
- Rotolo JA, Stancevic B, Lu SX, Zhang J, Suh D, King CG, Kappel LW, Murphy GF, Liu C, Fuks Z, van den Brink MR, Kolesnick R. (2009) Cytolytic T cells induce ceramide-rich platforms in target cell membranes to initiate graft-versus-host disease. Blood. 2009 Oct 22;114(17):3693-706. .PMID: 196668.
- Shelton C.C., Tian Y., Frattini M.G., Li Y.M. (2009) An exo-cell assay for examining real-time gamma-secretase activity and inhiobition. Mol Neurodegener Jun;2(4):22.
- Kashyap V., Rezende N.C., Scotland K.B., Shaffer S.M., Persson J.L., Gudas L.J., Mongan N.P. (2009) Regulation of stem cell pluripotency and differentiation involves a mutual regulatory circuit of the Nanog, OCT4 and SOX2 pluripotency transcription factors with polycomb reoressive comlexes and stem cell micro-RNAs. Stem Cells Dev. 2009 Sep;18(7):1093-108.
- Rotolo JA, Stancevic B, Lu SX, Zhang J, Suh D, King CG, Kappel LW, Murphy GF, Liu C, Fuks Z, van den Brink MR, Kolesnick R. Cytolytic T cells induce ceramide-rich platforms in target cell membranes to initiate graft-versus-host disease. Blood. 2009 Oct 22;114(17):3693-706.
- Charles N, Holland EC. Brain tumor treatment increases the number of cancer stem-like cells. Expert Rev Neurother. 2009 Oct;9(10):1447-9
- Tang X.H., Su D., Albert M., Scognamiglio T., Gudas L.J. (2009) Overexpression of lecithin:retinol acyltransferase in the epithelial basal layer makes mice more sensitive to oral cavity carcinogenesis induced by a carcinogen. Cancer Biol Ther. 2009 Jul;8(13):1214-25.
- Broadbelt N.V., Chen J., Silver R.B., Poppas D.P. Felsen D. (2009) Pressure activates epidermal growth factor receptor (EGFR) leading to the induction of iNOS via NF{kappa}B and STAT3 in human proximal tubule cells (HKC-8). Am J Physiol Renal Physiol. 2009 Jul;297(1):F114-24.
- Placanica L., Zhu L, Li Y.M. (2009) Gender- and - age-dependent gamma-secretase activity in mouse brain and its implication in sporadic Alzheimer disease. PLoS ONE 4(4):e5088.
- Oh J.E., Zupan B., Gross S., Toth M. (2009) Paradoxical Anxiogenic Response of Juvenile Mice to Fluoxetine. Neuropsychopharmacology. 2009 Sep;34(10):2197-207.
- Scotland KB, Chen S, Sylvester R, Gudas LJ. Analysis of Rex1 (zfp42) function in embryonic stem cell differentiation. Dev Dyn. 2009 Aug;238(8):1863-77.
- Dao T, Korontsvit T, Zakhaleva V, Haro K, Packin J, Scheinberg DA. Identification of a human cyclin D1-derived peptide that induces human cytotoxic CD4 T cells. PLoS One. 2009 Aug 25;4(8):e6730.
- Bultje RS, Castaneda-Castellanos DR, Jan LY, Jan YN, Kriegstein AR, Shi SH. Mammalian Par3 regulates progenitor cell asymmetric division via notch signaling in the developing neocortex. Neuron. 2009 Jul 30;63(2):189-202.
- Dorn D.C., Kou C.A., Png K.J., Moore M.A. (2009) The effect of cantharidins on leukimic stem cells. Int J Cancer May1;124(9):2186-99.
- Sun Y., Zupan B., Raaka B.M., Toth M., Gershengorn M.C. (2009) TRH-receptor-type-2-deficient mice are euthyroid and exhibit increased depression and reduced anxiety phenotypes. Neuropsychopharmacology May;34(6):1601-8.
- McCrossan Z.A., Roepke T.K., Lewis A., Panaghie G., Abbott G.W. (2009) Regulation of the Kv2.1 potassium channel by MinK and MiRP1. J Membr Biol, Mar;228(1):1-14.
- Yu Y.C., Bultje R.S., Wang X., Shi S.H. (2009) Specific synapses develop preferentially among sister excitatory neurons in the neocortex. Nature Mar 26;458(7237):501-4.
- Branski R.C., Barbieri S.S., Weksler B.S., Saltman B., Krishna P., Kraus D.H., Broadbelt N.V., Chen J., Poppas D.P., Felsen D. (2009) Effects of transforming growth factor-beta1 on human vocal fold fibroblasts. Ann Otol Rhinol Laryngol Mar;118(3):218-26.
- Huse J.T., Brennan C., Hambardzumyan D., Wee B., Pena J., Rouhanifard S.H., Sohn-Lee C., Le Sage C., Agami R., Tuschl T., Holland E. (2009) The PTEN-regulating microRNA miR-26a is amplified in high-grade glioma and facilitates gliomagenesis in vivo. Genes & Development, 23:1327-1337.
- Yang G., Yin Y.I., Shelton C.C., Ouerfelli O., and Li Y.M. (2009) Strereo-controlled synthesis of novel photoreactive gamma-secretase inhibitors. Bioorg Med Chem Lett, 19(3): 922-925.
- Placanica L., Tarassishin L., Yang G., Peethumnongsin E., Kim S.H., Zheng H., Sisodia S.S., and Li Y.M. (2009) Pen2 and Presenilin-1 Modulate the Dynamic Equilibrium of Presenilin-1 and Presenilin-2{gamma}-Secretase complexes. J Bio Chem;284(5):2967-2977.
- Meng R.D., Shelton C.C., Li Y.M., Qin L.X., Notterman D., Paty P.B., and Schwartz G.K. (2009) Gamma-secretase inhibitors abrogate oxaliplatin-induced activation of the Notch-1 signaling pathway in colon cancer cells resulting in enhanced chemosensitivity. Cancer Res; 69:573-582.
- Xu X., Kanda V.A., Choi E., Panaghie G., Roepke T.K., Gaeta S.A., Christini D.J., Lerner D.J., Abbott G.W. (2009) Mink-dependent internnalization of the IKs potassium channel. Cardiovascular Res. Jun 1;82(3);430-8.
- Zippin JH, Chadwick PA, Levin LR, Buck J, Magro CM. (2010) Soluble adenylyl cyclase defines a nuclear cAMP microdomain in keratinocyte hyperproliferative skin diseases. J Invest Dermatol. 2010 May;130(5):1279-87. PMID: 20130594
- Escobar-Alvarez S., Goldgur Y., Yang G., Ouerfelli O., Li Y., Scheinberg D.A. (2009) Structure and activity of human mitochondrial peptide deformylase, a novel cancer target. J Mol Biol Apr 17;387(5):1211-28.
- Acin-Perez R., Salazar E., Kamenetsky M, Buck J., Levin L.R., and Manfredi G. (2009) Cyclic AMP produced inside mitochondria regulates oxidative phosphorylation. Cell Metabol Mar;9(3):265-76.
- Rotolo J.A., Kolesnick R., and Fukc Z. (2009) Timing of lethality from gastrointestinal syndrome in mice revisited. Int J Radiat Oncol Biol Phys; 73(1):6-8.
- Fernandez C.C., Gudas L.J. (2009) The truncated Hoxa1 protein interacts with Hoxa1 and Pbx1 in stem cells. J Cell Biochem Feb 15;106(3):427-43.
- Bogulavsky J.J., Gregus A.M., Kim P.T., Costa A.C., Rajadhyaksha A.M., Inturrisi C.E. (2009) Deletion of the glutamate receptor 5 subunit of kainate receptors affects the development affects the development of morphine tolerance. J Pharmacol Exp Ther Feb;328(2):579-87.
- Tresguerres M, Parks SK, Salazar E, Levin LR, Goss GG, Buck J. (2010) Bicarbonate-sensing soluble adenylyl cyclase is an essential sensor for acid/base homeostasis. Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):442-7. PMID: 20018667.
2008
- Gomez-Nunez M., Haro K.J., Dao T., Chau D., Won A., Escobar-Alvarez S., Zakhaleva V., Korontsvit T., Gin D.Y., Schienberg D.A. (2008) Non-natural and photo-reactive amino acids as biochemical probes of immune function. PLoS ONE 3(12);e3938.
- Panaghie G., Purtell K, Tai K.K., Abbott G.W.(2008) Voltage-dependent C-type inactivation in a constitutively open K+ channel. Biophys J;95:2759-78.
- Paige J.S., Xu G., Stancevic B., Jaffrey S.R. (2008) Nitrosothiol reactivity profiling identifies S-nitrosylated proteins with unexpected stability. Chem Biol; 15(12):1307-1316.
- Xu Q., Garraway S.M., Weyerbacher A.R., Shin S.J., Inturrisi C.E. (2008) Activation of the neuronal extracellular signal-regulated kinase 2 in the spinal cord dorsal horn is required for complete Freund's adjuvant-induced pain hypersensitivity. J Neurosci; 28(52):14087-96.
- Villa C.H., McDevitt M.R., Escorcia F.E., Rey D.A., Bergkvist M., Batt C.A., Scheinberg D.A. (2008) Synthesis and Biodistribution of Oligonucleotide-Functionalized, Tumor-Targetable Carbon Nanotubes. Nano Lett Dec;8(12);4221-8.
- Farrell J., Ramos L., Tresguerres M., Kamenetsky M., Levin L.R., and Buck J. (2008) Somatic 'Soluble' adenylyn cyclase isoforms are unaffected in Sacy tm1Lex/Sacy tm1Lex 'Knockout' mice. PLoS ONE; 3(9):e3251.
- Ramos L.S., Zippin J.H., Kamentsky M., Buck J., Levin L.R. (2008) Glucose and GLP-1 stimulate cAMP production via distinct adenylyl cyclases in INS-1E insulinoma cells. J Gen Physiol Sep;132(3):329-38.
- Xu J., Sylvester R., Tighe A.P., Chen S., Gudas L.J. (2008) Transcriptional activation of the suppressor of cytokine signaling-3 (SOCS-3) gene via STAT3 is increased in F9 REX1 (ZFP-42) knockout teratocarcinoma stem cells relative to wil-type cells. J Mol Biol, 377:28-46.
- Guasparri, I., Bubman, D., and Cesarman, E. (2008) EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression. Blood, 111:3813-3820.
- Nuriel, T., Deeb, R.S., Hajjar, D.P., and Gross, S.S. (2008) Protein 3-nitrotyrosine in complex biological samples: quantification by high-pressure liquid chromatography/electrochemical detection and emergence of proteomic approaches for unbiased identification of modification sites. Methods Enzymol, 441:1-17.
- Cheng, H.T., Suzuki, M., Hegarty, D.M., Xu, Q., Weyerbacher, A.R., South, S.M., Ohata, M., and Inturrisi, C.E. (2008) Inflammatory pain-induced signaling events following a conditional deletion of the N-methyl-d-aspartate receptor in spinal cord dorsal horn. Neuroscience Aug 26;155(3):948-58.
- Tatapudy, S., Bruening, S., Gleason, G., and Toth, M. (2008) Validation and use of a computer-assisted counting procedure to quantify BrdU-labeled proliferating cells in the early postnatal mouse hippocampus. J Neurosci Methods Jul 30;172(2);173-7..
- Abbott, G.W., Gordon, E., and Davison, J. (2008) Expanding roles of Aboriginal health workers in the primary care setting: seeking recognition. Contemp Nurse, 27:157-164.
- Zupan B., and Toth M., (2008) Inactivation of the maternal fragile X gene results in sensitization of GABA receptor function in the offspring. J Pharmacol Exp ther. Dec;327(3):820-6.
- Pratilas CA, Hanrahan AJ, Halilovic E, Persaud Y, Soh J, Chitale D, Shigematsu H, Yamamoto H, Sawai A, Janakiraman M, Taylor BS, Pao W, Toyooka S, Ladanyi M, Gazdar A, Rosen N, Solit DB. Genetic predictors of MEK dependence in non-small cell lung cancer. Cancer Res. 2008 Nov 15;68(22):9375-83.
- Zupan, B. and Toth, M. (2008) Wild-Type Male Offspring of fmr-1(+/-) Mothers Exhibit Characteristics of the Fragile X Phenotype. Neuropsychopharmacology Oct;33(11):2667-75.
- Gordon, E., Panaghie, G., Deng, L., Bee, K. J., Roepke, T. K., Krogh-Madsen, T., Christini, D. J., Ostrer, H., Basson, C. T., Chung, W., and Abbott, G. W. (2008) A KCNE2 mutation in a patient with cardiac arrhythmia induced by auditory stimuli and serum electrolyte imbalance. Cardiovasc Res, 77:98-106.
- Su, D. and Gudas, L. J. (2008) Gene expression profiling elucidates a specific role for RARgamma in the retinoic acid-induced differentiation of F9 teratocarcinoma stem cells. Biochem Pharmacol, 75:1129-1160.
- Taldone T., Gozman A., Maharaj R., Chiosis G. (2008) Targeting Hsp90: smallmolecule inhibitors and their clinical development. Curr Opin Pharmacol Aug;8(4):370-4.
- Halilovic E, Solit DB. Therapeutic strategies for inhibiting oncogenic BRAF signaling. Curr Opin Pharmacol. 2008 Aug;8(4):419-26.
- Langton, S. and Gudas, L. J. (2008) CYP26A1 knockout embryonic stem cells exhibit reduced differentiation and growth arrest in response to retinoic acid. Dev Biol, 315:331-354.
- Rotolo, J. A., Maj, J. G., Feldman, R., Ren, D., Haimovitz-Friedman, A., Cordon-Cardo, C., Cheng, E. H., Kolesnick, R., and Fuks, Z. (2008) Bax and Bak do not exhibit functional redundancy in mediating radiation-induced endothelial apoptosis in the intestinal mucosa. Int J Radiat Oncol Biol Phys, 70:804-815.
- Platholi, J., Heerdt, P. M., Lim Tung, H. Y., and Hemmings, H. C., Jr. (2008) Activation of brain protein phosphatase-1(I) following cardiac arrest and resuscitation involving an interaction with 14-3-3gamma. J Neurochem. 105(5):2029-38.
- Zhang, T. T., Platholi, J., Heerdt, P. M., Hemmings, H. C., Jr., and Tung, H. Y. (2008) Protein phosphatase-2A is activated in pig brain following cardiac arrest and resuscitation. Metab Brain Dis, 23:95-104.
- Su, D. and Gudas, L. J. (2008) Retinoic acid receptor gamma activates receptor tyrosine kinase Tie1 gene transcription through transcription factor GATA4 in F9 stem cells. Exp Hematol, 36:624-641.
- Young J.J., Mehdi A., Stohl L.L., Levin L.R., Buck J., Wagner J.A., Stessin A. (2008) "Soluble" adenylyl cyclase-generated cyclic adenosine monophosphate promotes fast migration in PC12 cells. J Neurosci Res Jan;86(1):188-24.
2007
- Nolan, D. J., Ciarrocchi, A., Mellick, A. S., Jaggi, J. S., Bambino, K., Gupta, S., Heikamp, E., McDevitt, M. R., Scheinberg, D. A., Benezra, R., and Mittal, V. (2007) Bone marrow-derived endothelial progenitor cells are a major determinant of nascent tumor neovascularization. Genes Dev, 21:1546-1558.
- McDevitt, M. R., Chattopadhyay, D., Jaggi, J. S., Finn, R. D., Zanzonico, P. B., Villa, C., Rey, D., Mendenhall, J., Batt, C. A., Njardarson, J. T., and Scheinberg, D. A. (2007) PET imaging of soluble yttrium-86-labeled carbon nanotubes in mice. PLoS ONE, 2:e907.
- Gillespie, R. F. and Gudas, L. J. (2007) Retinoic acid receptor isotype specificity in F9 teratocarcinoma stem cells results from the differential recruitment of coregulators to retinoic response elements. J Biol Chem, 282:33421-33434.
- Gillespie, R. F. and Gudas, L. J. (2007) Retinoid regulated association of transcriptional co-regulators and the polycomb group protein SUZ12 with the retinoic acid response elements of Hoxa1, RARbeta(2), and Cyp26A1 in F9 embryonal carcinoma cells. J Mol Biol, 372:298-316.
- Bubman, D., Guasparri, I., and Cesarman, E. (2007) Deregulation of c-Myc in primary effusion lymphoma by Kaposi's sarcoma herpesvirus latency-associated nuclear antigen. Oncogene, 26:4979-4986.
- Choi, E. and Abbott, G. W. (2007) The MiRP2-Kv3.4 potassium channel: muscling in on Alzheimer's disease. Mol Pharmacol, 72:499-501.
- Antczak, C., Shum, D., Escobar, S., Bassit, B., Kim, E., Seshan, V. E., Wu, N., Yang, G., Ouerfelli, O., Li, Y. M., Scheinberg, D. A., and Djaballah, H. (2007) High-throughput identification of inhibitors of human mitochondrial peptide deformylase. J Biomol Screen, 12:521-535.
- Escorcia, F. E., McDevitt, M. R., Villa, C. H., and Scheinberg, D. A. (2007) Targeted nanomaterials for radiotherapy. Nanomed, 2:805-815.
- Abbott, P., Gordon, E., and Davison, J. (2007) Expanding roles of Aboriginal health workers in the primary care setting: seeking recognition. Contemp Nurse, 26:66-73.
- Garraway, S. M., Xu, Q., and Inturrisi, C. E. (2007) Design and evaluation of small interfering RNAs that target expression of the N-methyl-D-aspartate receptor NR1 subunit gene in the spinal cord dorsal horn. J Pharmacol Exp Ther, 322:982-988.
- Jaggi, J. S., Carrasquillo, J. A., Seshan, S. V., Zanzonico, P., Henke, E., Nagel, A., Schwartz, J., Beattie, B., Kappel, B. J., Chattopadhyay, D., Xiao, J., Sgouros, G., Larson, S. M., and Scheinberg, D. A. (2007) Improved tumor imaging and therapy via i.v. IgG-mediated time-sequential modulation of neonatal Fc receptor.J Clin Invest, 117:2422-2430.
- McDevitt, M. R., Chattopadhyay, D., Kappel, B. J., Jaggi, J. S., Schiffman, S. R., Antczak, C., Njardarson, J. T., Brentjens, R., and Scheinberg, D. A. (2007) Tumor targeting with antibody-functionalized, radiolabeled carbon nanotubes. J Nucl Med, 48: 1180-1189.
- Singh Jaggi, J., Henke, E., Seshan, S. V., Kappel, B. J., Chattopadhyay, D., May, C., McDevitt, M. R., Nolan, D., Mittal, V., Benezra, R., and Scheinberg, D. A. (2007) Selective alpha-particle mediated depletion of tumor vasculature with vascular normalization. PLoS ONE, 2:e267.
- Sofou, S., Kappel, B. J., Jaggi, J. S., McDevitt, M. R., Scheinberg, D. A., and Sgouros, G. (2007) Enhanced retention of the alpha-particle-emitting daughters of Actinium-225 by liposome carriers. Bioconjug Chem, 18:2061-2067.
- Angeles, A. R., Dorn, D. C., Kou, C. A., Moore, M. A., and Danishefsky, S. J. (2007) Total synthesis of peribysin E necessitates revision of the assignment of its absolute configuration. Angew Chem Int Ed Engl, 46:1451-1454.
- Lahiri, S., Lee, H., Mesicek, J., Fuks, Z., Haimovitz-Friedman, A., Kolesnick, R. N., and Futerman, A. H. (2007) Kinetic characterization of mammalian ceramide synthases: determination of K(m) values towards sphinganine. FEBS Lett, 581:5289-5294.
- Paige, J. S. and Jaffrey, S. R. (2007) Pharmacologic manipulation of nitric oxide signaling: targeting NOS dimerization and protein-protein interactions. Curr Top Med Chem, 7:97-114.
- Panaghie, G. and Abbott, G. W. (2007) The role of S4 charges in voltage-dependent and voltage-independent KCNQ1 potassium channel complexes. J Gen Physiol, 129:121-133.
- Vetrivel, K. S., Gong, P., Bowen, J. W., Cheng, H., Chen, Y., Carter, M., Nguyen, P. D., Placanica, L., Wieland, F. T., Li, Y. M., Kounnas, M. Z., and Thinakaran, G. (2007) Dual roles of the transmembrane protein p23/TMP21 in the modulation of amyloid precursor protein metabolism. Mol Neurodegener, 2:4.
- Bullock, S. A., Platholi, J., Gjyrezi, A., Heerdt, P. M., Tung, H. Y., and Hemmings, H. C., Jr. (2007) Differential regulation of protein phosphatase-1(I) by neurabin. Biochem Biophys Res Commun, 358:140-144.
- Derakhshan, B., Wille, P. C., and Gross, S. S. (2007) Unbiased identification of cysteine S-nitrosylation sites on proteins. Nat Protoc, 2:1685-1691.
- Shang, S., Iwadare, H., Macks, D. E., Ambrosini, L. M., and Tan, D. S. (2007) A unified synthetic approach to polyketides having both skeletal and stereochemical diversity. Org Lett, 9:1895-1898.
- Young, J.J.*, Mehdi, A.*, Stohl, L., Levin, L.R., Buck, J., Wagner, J.A., and Stessin A.M. (2007). 'Soluble' adenylyl cyclase-generated cyclic AMP promotes fast migration in PC12 cells. J. Neurosci. Res. 86:118-124.
- Yang T., Chan N.Y., and Sauve A.A. (2007) Syntheses of nicotinamide ribosideand derivatives: effective agents for increasing nicotinamide adenine dinucleotide concentrations in mammalian cells. J Med Chem;50(26):6458-6461.
- Broadbelt, N.V., Stahl P.J., Chen J., Mizrahi M., Lal A., Bozkurt A., Poppas D.P., Felsen D. (2007) Early upregulation of iNOS mRNA expression and increase in NO metabolites in pressurized renal epithelial cells. Am J Physiol Renal Physiol Dec;293(6):F1877-88.
2006
- Kamenetsky, M., Middelhaufe, S. Bank, E.M., Levin, L.R., Buck, J., and Steegborn, C. (2006). Molecular details of cAMP generation in mammalian cells: A tale of two systems. J. Mol. Biol. 362:623-629.
- Bruening S., Oh E., Hetzenauer A., Escobar-Alvarez S., Westphalen R.I., Hemmings H.C. Jr, Singewald N., Shippenberg T., and Toth M. (2006) The anxiety-like phenotype of 5-HT receptor null mice is associated with genetic background-specific perturbations in the prefrontal cortex GABA-glutamate system. J Neurochem. 99(3):892-899.
- Kushnir-Sukhov, N. M., Gilfillan, A. M., Coleman, J. W., Brown, J. M., Bruening, S., Toth, M., and Metcalfe, D. D. (2006) 5-hydroxytryptamine induces mast cell adhesion and migration. J Immunol, 177:6422-6432.
- Chaloupka, J.A., Bullock, S.A., Iourgenko, V., Levin, L.R., and Buck, J. (2006). Autoinhibitory regulation of soluble adenylyl cyclase. Mol. Repro & Dev. 73:361-368.
- Mogenson, E.G., Janbon, G., Chaloupka, J., Steegborn, C., Fu, M.S., Moyrand, F., Klengel, T., Pearson. D.S., Geeves, M.A., Buck. J., Levin, L.R.and Muhlschlegel, F.A. (2006). Cryptococcus senses CO2 through the carbonic anhydrase Can2 and the adenylyl cyclase Cac1. Eukaryotic Cell 5:103-111.
- Mahurter L., Garceau C., Marino J., Schmidhammer H., Toth G., Pasternak G.W. (2006) Separation of binding affinity and intrinsic activity of the potent mu opioid 14-methoxymetopon. J Pharmacol Exp Ther. 319(1):247-253.
- Gordon E., Roepke T.K., and Abbott G.W. (2006). Endogenous KCNE subunits govern Kv2.1 K+ channel activation kinetics in Xenopus oocyte studies. Biophysical Journal 90(4):1223-31.
- Gordon E., Cohen J.L., Engel R., and Abbott G.W. (2006). 1,4-diazabicyclo[2.2.2]octane derivatives: a novel class of voltage-gated potassium channel blockers. Molecular Pharmacology 69(3):718-726.
- Jaggi, J. S., Seshan, S. V., McDevitt, M. R., Sgouros, G., Hyjek, E., and Scheinberg, D. A. (2006) Mitigation of radiation nephropathy after internal alpha-particle irradiation of kidneys. Int J Radiat Oncol Biol Phys, 64:1503-1512.
- Gomez-Nunez, M., Pinilla-Ibarz, J., Dao, T., May, R. J., Pao, M., Jaggi, J. S., and Scheinberg, D. A. (2006) Peptide binding motif predictive algorithms correspond with experimental binding of leukemia vaccine candidate peptides to HLA-A*0201 molecules. Leuk Res, 30:1293-1298.
- Wu, K.Y., Zippin, J.H., Huron, D.R., Kamenetsky M., Hengst, U., Buck, J., Levin, L.R., and Jaffrey, S.R. (2006). Soluble adenylyl cyclase is required for netrin-1 signaling in nerve growth cones. Nat Neurosci. 9:1257-1264.
- Stessin, A.M., Zippin, J.H., Kamenetsky M., Hess, K.C., Buck, J., and Levin, L.R. (2006). Soluble adenylyl cyclase mediates NGF-induced activation of RAP1. J. Biol. Chem. 281:17253-17258.
- Pinilla-Ibarz, J., May, R. J., Korontsvit, T., Gomez, M., Kappel, B., Zakhaleva, V., Zhang, R. H., and Scheinberg, D. A. (2006) Improved human T-cell responses against synthetic HLA-0201 analog peptides derived from the WT1 oncoprotein. Leukemia, 20:2025-2033.
- Kappel, B. J., Pinilla-Ibarz, J., Kochman, A. A., Eng, J. M., Hubbard, V. M., Leiner, I., Pamer, E. G., Heller, G., van den Brink, M. R., and Scheinberg, D. A. (2006) Remodeling specific immunity by use of MHC tetramers: demonstration in a graft-versus-host disease model. Blood, 107:2045-2051.
- Antczak, C., Jaggi, J. S., LeFave, C. V., Curcio, M. J., McDevitt, M. R., and Scheinberg, D. A. (2006) Influence of the linker on the biodistribution and catabolism of actinium-225 self-immolative tumor-targeted isotope generators. Bioconjug Chem, 17:1551-1560.
- Panaghie G.; Tai K.K.; Abbott G.W. (2006) Interaction of KCNE subunits with the KCNQ1 K+ channel pore. Journal of Physiology 570 (Pt 3):455-67.
- Panaghie G.; Abbott G.W. (2006) The impact of ancillary subunits on small-molecule interactions with voltage-gated potassium channels. Current Pharmaceutical Design 12(18):2285-2302.
- Yun, S.W., Platholi, J., Flaherty, M.S., Fu, W., Kottmann, A.H., and Toth, M. (2006) Fmrp is required for the establishment of the startle response during the critical period of auditory development. Brain Res. 1110(1):159-65.
- Moilanen, S. B.; Potuzak, J. S.; Tan, D. S. (2006) Stereocontrolled synthesis of spiroketals via a Ti(Oi-Pr)4-mediated kinetic spirocyclization of glycal epoxides with retention of configuration. J Am Chem Soc. 128:1792-1793.
- Sheren-Manoff, M., Shin, S. J., Su, D., Bok, D., Rando, R. R., and Gudas, L. J. (2006) Reduced lecithin:retinol acyltransferase expression in human breast cancer. Int J Oncol, 29:1193-1199.
2005
- Fan W, Bubman D, Chadburn A, Harrington WJ Jr, Cesarman E, Knowles DM. (2005) Distinct subsets of primary effusion lymphoma can be identified based on their cellular gene expression profile and viral association. J Virol. 79(2):1244-51.
- Klengel, T.*, Liang, W-J.*, Chaloupka, J.A.*, Ruoff, C.,Schroppel, K., Naglik, J.R., Eckert, S.E., Gweiss, E., Haynes, K., Tuitte, M.F., Levin, L.R., Buck, J., and Muhlschlegel, F.A. (2005). Fungal adenylyl cyclase integrates CO2 sensing with CAMP aignalling and virulence. Curr. Biol. 15:2021-2026. (*contributed to equally).
- Dao, T., Gomez-Nunez, M., Antczak, C., Kappel, B., Jaggi, J. S., Korontsvit, T., Zakhaleva, V., and Scheinberg, D. A. (2005) Natural killer cells license dendritic cell cross-presentation of B lymphoma cell--associated antigens. Clin Cancer Res, 11:8763-8772.
- Jaggi JS, Seshan SV, McDevitt MR, Laperle K, Sgouros G, Scheinberg DA. (2005) Renal Tubulointerstitial Changes after Internal Irradiation with {alpha}-Particle-Emitting Actinium Daughters. J Am Soc Nephrol. 16(9):2677-2689.
- Jaggi JS, Kappel BJ, McDevitt MR, Sgouros G, Flombaum CD, Cabassa C and Scheinberg DA. (2005) Efforts to Control the Errant Products of a Targeted In vivo Generator. Cancer Research 65(11):4888-95.
- Han H, Stessin A, Roberts J, Hess K, Gautam N, Kamenetsky M, Lou O, Hyde E, Nathan N, Muller WA, Buck J, Levin LR, Nathan C. (2005) Calcium-sensing soluble adenylyl cyclase mediates TNF signal transduction in human neutrophils. J Exp Med. 202(3):353-61.
- Hess KC, Jones BH, Marquez B, Chen Y, Ord TS, Kamenetsky M, Miyamoto C, Zippin JH, Kopf GS, Suarez SS, Levin LR, Williams CJ, Buck J, Moss SB. (2005) The "soluble" adenylyl cyclase in sperm mediates multiple signaling events required for fertilization. Dev Cell. 9(2):249-59.
- Wu KY, Hengst U, Cox LJ, Macosko EZ, Jeromin A, Urquhart ER, Jaffrey SR. (2005) Local translation of RhoA regulates growth cone collapse. Nature. 436(7053):1020-4.
- Potuzak, J. S.; Moilanen, S. B.; Tan, D. S. (2005) Stereocontrolled synthesis of spiroketals via a remarkable methanol-induced kinetic spirocyclization reaction. J Am Chem Soc. 127:13796-13797.
- Rotolo, J.A., Zhang, J., Donepudi, M., Lee, H., Fuks, Z., Kolesnick, R. (2005) Caspase-dependent and-independent activation of acid sphingomyelinase signaling. J Biol Chem. 280(28):26425-26434.
- Shang, S. and Tan, D. S. (2005) Advancing chemistry and biology through diversity-oriented synthesis of natural product-like libraries. Curr Opin Chem Biol, 9:248-258.
- Touma, S. E., Goldberg, J. S., Moench, P., Guo, X., Tickoo, S. K., Gudas, L. J., and Nanus, D. M. (2005) Retinoic acid and the histone deacetylase inhibitor trichostatin a inhibit the proliferation of human renal cell carcinoma in a xenograft tumor model. Clin Cancer Res, 11:3558-3566.
- Kortmansky, J., Shah, M. A., Kaubisch, A., Weyerbacher, A., Yi, S., Tong, W., Sowers, R., Gonen, M., O'Reilly, E., Kemeny, N., Ilson, D. I., Saltz, L. B., Maki, R. G., Kelsen, D. P., and Schwartz, G. K. (2005) Phase I trial of the cyclin-dependent kinase inhibitor and protein kinase C inhibitor 7-hydroxystaurosporine in combination with Fluorouracil in patients with advanced solid tumors. J Clin Oncol, 23:1875-1884.
- Shah, M. A., Kortmansky, J., Motwani, M., Drobnjak, M., Gonen, M., Yi, S., Weyerbacher, A., Cordon-Cardo, C., Lefkowitz, R., Brenner, B., O'Reilly, E., Saltz, L., Tong, W., Kelsen, D. P., and Schwartz, G. K. (2005) A phase I clinical trial of the sequential combination of irinotecan followed by flavopiridol. Clin Cancer Res, 11:3836-3845.
2004
- Zippin JH, Farrell J, Huron DR, Kamenetsky M, Hess KC, Fischman DA, Levin LR, Buck J. (2004) Bicarbonate-responsive "soluble" adenylyl cyclase defines a nuclear cAMP microdomain. J Cell Biol. 164(4):527-34.
- Potuzak, J. S., Tan, D. S. (2004) Synthesis of C1-alkyl- and acylglycals from glycals using a B-alkyl Suzuki-Miyaura cross coupling approach. Tetrahedron Lett. 45:1797-1801.
- Potuzak, J. S., Moilanen, S. B.; Tan, D. S. (2004) Discovery and applications of small molecule probes for studying biological processes. Biotechnol. Genet. Eng. Rev. 21:11-78.
2003
- Bubman D, Cesarman E. (2003) Pathogenesis of Kaposi's sarcoma. Hematol Oncol Clin North Am 17:717-45.
- Anantharam A., Lewis A., Panaghie G., Gordon E., McCrossan Z.A., Lerner D.J., and Abbott G.W. (2003) RNA interference reveals that endogenous Xenopus MinK-related peptides govern mammalian K+ channel function in oocyte expression studies. J Biol Chem 278:11739-45.
- Huron DR, Gorre ME, Kraker AJ, Sawyers CL, Rosen N, & Moasser, MM. (2003) A Novel Pyridopyrimidine Inhibitor of Abl Kinase Is a Picomolar Inhibitor of Bcr-abl-driven K562 Cells and Is Effective against STI571-resistant Bcr-abl Mutants. Clin Cancer Res 9:1267-73.
- Litvin TN, Kamenetsky M, Zarifyan A, Buck J, Levin LR. (2003) Kinetic properties of "soluble" adenylyl cyclase. Synergism between calcium and bicarbonate. J Biol Chem 278:15922-6.
- Zippin JH, Chen Y, Nahirney P, Kamenetsky M, Wuttke MS, Fischman DA, Levin LR, Buck J. (2003) Compartmentalization of bicarbonate-sensitive adenylyl cyclase in distinct signaling microdomains. FASEB J 17:82-4.
- McCrossan Z.A.; Lewis A.; Panaghie G.; Jordan P.N.; Christini D.J.; Lerner D.J.; Abbott GW. (2003) MinK-related peptide 2 modulates Kv2.1 and Kv3.1 potassium channels in mammalian brain. J Neurosci. 23(22):8077-91.
2002
- Birk AV, Bubman D, Broekman MJ, Robertson HD, Drosopoulos JH, Marcus AJ, Szeto HH. (2002) Role of a novel soluble nucleotide phospho-hydrolase from sheep plasma in inhibition of platelet reactivity: hemostasis, thrombosis, and vascular biology. J Lab Clin Med 139:116-24.